myRT

myRT report for GCA_001276745.1_ASM127674v1

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Seq: JZTN01000039.1 Salmonella enterica subsp. enterica serovar Senftenberg strain 50263 50263_c39, whole genome shotgun sequence (78798 bp)
Overview 1 RT 1: 28573-33146 bp Neighborhood of RT #1 [28573, 33154] INT_P4_C RVT-Retrons PRK10473 Feature: gene Location: 28573-28851 bp Feature: domain Description: INT_P4_C Location: 28603-28780 bp Feature: domain Description: INT_P4_C Location: 28603-28780 bp Feature: gene Location: 29176-30138 bp Feature: gene Location: 30138-31073 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30249-30834 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30249-30834 bp Feature: gene Location: 31331-31459 bp Feature: gene Location: 31967-33154 bp Feature: domain Description: PRK10473 Location: 31970-33146 bp Feature: domain Description: PRK1 0473 Location: 31 970-331 46 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter)

Seq: JZTN01000068.1 Salmonella enterica subsp. enterica serovar Senftenberg strain 50263 50263_c68, whole genome shotgun sequence (6232 bp)
Overview 1 RT 1: 3263-4867 bp Neighborhood of RT #1 [3263, 4878] DDE_Tnp_IS1 RVT-GII DUF903 DUF903 Feature: gene Location: 3263-3412 bp Feature: gene Location: 3396-3635 bp Feature: domain Description: DDE_Tnp_IS1 Location: 3399-3633 bp Feature: domain Description: DDE_Tnp_IS1 Location: 3399-3633 bp Feature: gene Location: 3670-4296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3991-4201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3991-42 01 bp Feature: gene Location: 4402-4629 bp Feature: domain Description: DUF903 Location: 4480-4618 bp Feature: domain Description: DUF903 Location: 4480-4618 bp Feature: gene Location: 4645-4878 bp Feature: domain Description: DUF903 Location: 4723-4867 bp Feature: domain Description: DUF903 Location: 472 3-4867 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), RVT-GII, DUF903 (pfam06004)