myRT

myRT report for GCA_001276765.1_ASM127676v1

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Seq: JZTO01000031.1 Salmonella enterica subsp. enterica serovar Senftenberg strain 50264 50264_c31, whole genome shotgun sequence (56382 bp)
Overview 1 RT 1: 36064-37668 bp Neighborhood of RT #1 [36064, 37679] DDE_Tnp_IS1 RVT-GII DUF903 DUF903 Feature: gene Location: 36064-36213 bp Feature: gene Location: 36197-36436 bp Feature: domain Description: DDE_Tnp_IS1 Location: 36200-36434 bp Feature: domain Description: DDE_Tnp_IS1 Location: 36200-36434 bp Feature: gene Location: 36471-37097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36792-37002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36792-37002 bp Feature: gene Location: 37203-37430 bp Feature: domain Description: DUF903 Location: 37281-37419 bp Feature: domain Description: DUF903 Location: 37281 -3741 9 bp Feature: gene Location: 37446-37679 bp Feature: domain Description: DUF903 Location: 37524-37668 bp Feature: domain Description: DUF903 Location: 37524-37668 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), RVT-GII, DUF903 (pfam06004)

Seq: JZTO01000032.1 Salmonella enterica subsp. enterica serovar Senftenberg strain 50264 50264_c32, whole genome shotgun sequence (79417 bp)
Overview 1 RT 1: 28592-33165 bp Neighborhood of RT #1 [28592, 33173] INT_P4_C RVT-Retrons PRK10473 Feature: gene Location: 28592-28870 bp Feature: domain Description: INT_P4_C Location: 28622-28799 bp Feature: domain Description: INT_P4_C Location: 2 862 2 -2 8799 bp Feature: gene Location: 29195-30157 bp Feature: gene Location: 30157-31092 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30268-30853 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 302 68-30853 bp Feature: gene Location: 31350-31478 bp Feature: gene Location: 31986-33173 bp Feature: domain Description: PRK10473 Location: 31989-33165 bp Feature: domain Description: PRK10473 Location: 31989-33165 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter)