myRT

myRT report for GCA_001276775.1_ASM127677v1

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Seq: JZTP01000019.1 Salmonella enterica subsp. enterica serovar Senftenberg strain 50265 50265_c19, whole genome shotgun sequence (55268 bp)
Overview 1 RT 1: 5043-9616 bp Neighborhood of RT #1 [5043, 9624] INT_P4_C RVT-Retrons PRK10473 Feature: gene Location: 5043-5321 bp Feature: domain Description: INT_P4_C Location: 5073-5250 bp Feature: domain Description: INT_P4_C Location: 5073-5250 bp Feature: gene Location: 5646-6608 bp Feature: gene Location: 6608-7543 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6719-7304 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 671 9-7304 bp Feature: gene Location: 7801-7929 bp Feature: gene Location: 8437-9624 bp Feature: domain Description: PRK10473 Location: 8440-9616 bp Feature: domain Description: PRK1 0473 Location: 8440-961 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter)

Seq: JZTP01000054.1 Salmonella enterica subsp. enterica serovar Senftenberg strain 50265 50265_c54, whole genome shotgun sequence (38576 bp)
Overview 1 RT 1: 35607-37211 bp Neighborhood of RT #1 [35607, 37222] DDE_Tnp_IS1 RVT-GII DUF903 DUF903 Feature: gene Location: 35607-35756 bp Feature: gene Location: 35740-35979 bp Feature: domain Description: DDE_Tnp_IS1 Location: 35743-35977 bp Feature: domain Description: DDE_Tnp_IS1 Location: 35743-35977 bp Feature: gene Location: 36014-36640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36335-36545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36335-36545 bp Feature: gene Location: 36746-36973 bp Feature: domain Description: DUF903 Location: 36824-36962 bp Feature: domain Description: DUF903 Location: 3682 4-36962 bp Feature: gene Location: 36989-37222 bp Feature: domain Description: DUF903 Location: 37067-37211 bp Feature: domain Description: DUF903 Location: 37067-372 11 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), RVT-GII, DUF903 (pfam06004)