myRT

myRT report for GCA_001276825.1_ASM127682v1

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Seq: JZTU01000011.1 Salmonella enterica subsp. enterica serovar Senftenberg strain 50271 50271_c11, whole genome shotgun sequence (20998 bp)
Overview 1 RT 1: 6277-10218 bp Neighborhood of RT #1 [6277, 10218] InsQ RVT-GII Feature: gene Location: 6277-7413 bp Feature: domain Description: InsQ Location: 6295-7390 bp Feature: domain Description: InsQ Location: 6295-7390 bp Feature: gene Location: 7678-7899 bp Feature: gene Location: 7896-8873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8232-8748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8232-8748 bp Feature: gene Location: 8888-9268 bp Feature: gene Location: 9934-10218 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT-GII

Seq: JZTU01000038.1 Salmonella enterica subsp. enterica serovar Senftenberg strain 50271 50271_c38, whole genome shotgun sequence (78865 bp)
Overview 1 RT 1: 45712-49980 bp Neighborhood of RT #1 [45712, 49980] PRK10473 RVT-Retrons Feature: gene Location: 45712-46899 bp Feature: domain Description: PRK10473 Location: 45715-46891 bp Feature: domain Description: PRK10473 Location: 45715-46891 bp Feature: gene Location: 47237-47446 bp Feature: gene Location: 47793-48728 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47904-48489 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47904-48489 bp Feature: gene Location: 48728-49690 bp Feature: gene Location: 49717-49980 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10473 (MdtL family multidrug efflux MFS transporter), RVT-Retrons

Seq: JZTU01000081.1 Salmonella enterica subsp. enterica serovar Senftenberg strain 50271 50271_c81, whole genome shotgun sequence (36879 bp)
Overview 1 RT 1: 34502-36797 bp Neighborhood of RT #1 [34502, 36811] DDE_Tnp_IS1 RVT-GII IS5 Feature: gene Location: 34502-34651 bp Feature: gene Location: 34635-34874 bp Feature: domain Description: DDE_Tnp_IS1 Location: 34638-34872 bp Feature: domain Description: DDE_Tnp_IS1 Location: 3 463 8-3 4872 bp Feature: gene Location: 34909-35535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35230-35440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 523 0-3 5440 bp Feature: gene Location: 35644-35793 bp Feature: gene Location: 35831-36811 bp Feature: domain Description: IS5 Location: 36020-36797 bp Feature: domain Description: IS5 Location: 3 6020-3 6797 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), RVT-GII, IS5 (COG3039)