myRT

myRT report for GCA_001276925.1_ASM127692v1

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Seq: JZTV01000025.1 Salmonella enterica subsp. enterica serovar Senftenberg strain 50272 50272_c25, whole genome shotgun sequence (79230 bp)
Overview 1 RT 1: 46058-50326 bp Neighborhood of RT #1 [46058, 50326] PRK10473 RVT-Retrons Feature: gene Location: 46058-47245 bp Feature: domain Description: PRK10473 Location: 46061-47237 bp Feature: domain Description: PRK1 0473 Location: 46061 -47237 bp Feature: gene Location: 47583-47792 bp Feature: gene Location: 48139-49074 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 48250-48835 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 48250-48835 bp Feature: gene Location: 49074-50036 bp Feature: gene Location: 50063-50326 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10473 (MdtL family multidrug efflux MFS transporter), RVT-Retrons

Seq: JZTV01000028.1 Salmonella enterica subsp. enterica serovar Senftenberg strain 50272 50272_c28, whole genome shotgun sequence (63486 bp)
Overview 1 RT 1: 23245-25916 bp Neighborhood of RT #1 [23245, 25916] DDE_Tnp_IS66_C IS5 RVT-GII DDE_Tnp_IS1 Feature: gene Location: 23245-23430 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 23296-23407 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2 32 96-2 3407 bp Feature: gene Location: 23571-24587 bp Feature: domain Description: IS5 Location: 23796-24573 bp Feature: domain Description: IS5 Location: 2 3796-2 4573 bp Feature: gene Location: 24883-25509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25204-25414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 52 04-2 5414 bp Feature: gene Location: 25544-25783 bp Feature: domain Description: DDE_Tnp_IS1 Location: 25547-25781 bp Feature: domain Description: DDE_Tnp_IS1 Location: 2 5547-2 5781 bp Feature: gene Location: 25767-25916 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), IS5 (COG3039), RVT-GII, DDE_Tnp_IS1 (pfam03400)