myRT

myRT report for GCA_001277435.1_7748_7_2

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Seq: CYAE01000046.1 Escherichia coli genome assembly 7748_7#2, scaffold ERS085335SCcontig000046, whole genome shotgun sequence (24110 bp)
Overview 1 RT 1: 756-4510 bp Neighborhood of RT #1 [756, 4512] RVT-GII GIIM fecE Feature: gene Location: 756-2279 bp Ori: CTT41480.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1029-1761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 029-1 761 bp Feature: domain Description: GIIM Note: maturase Location: 1836-2034 bp Feature: domain Description: GIIM Note: maturase Location: 1 836-2034 bp Feature: gene Location: 2930-3187 bp Feature: gene Location: 3745-4512 bp Ori: CTT41533.1 Gene: fecE Feature: domain Description: fecE Location: 3748-4510 bp Feature: domain Description: fecE Location: 3748-451 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), fecE (PRK11231)

Seq: CYAE01000022.1 Escherichia coli genome assembly 7748_7#2, scaffold ERS085335SCcontig000022, whole genome shotgun sequence (90418 bp)
Overview 1 RT 1: 69886-77696 bp Neighborhood of RT #1 [69886, 77701] Phage_GPA RVT-AbiP2 RVT-Retrons Q Feature: gene Location: 69886-72162 bp Ori: CTS94037.1 Feature: domain Description: Phage_GPA Location: 70285-71272 bp Feature: domain Description: Phage_GPA Location: 702 85-712 72 bp Feature: gene Location: 72266-72484 bp Feature: gene Location: 72650-74194 bp Ori: CTS94103.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 73067-73520 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 73067-7352 0 bp Feature: gene Location: 74570-74686 bp Feature: gene Location: 74751-75935 bp Ori: CTS94174.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 74895-75477 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 74895-75477 bp Feature: gene Location: 75932-76639 bp Feature: gene Location: 76682-77701 bp Ori: CTS94251.1 Feature: domain Description: Q Location: 76685-77696 bp Feature: domain Description: Q Location: 76685-77696 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_GPA (pfam05840), RVT-AbiP2, RVT-Retrons, Q (PHA02536)