myRT

myRT report for GCA_001277775.1_7790_1_60

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Seq: CYBT01000001.1 Escherichia coli genome assembly 7790_1#60, scaffold ERS085393SCcontig000001, whole genome shotgun sequence (450639 bp)
Overview 1 RT 1: 176876-180738 bp Neighborhood of RT #1 [176876, 180743] Ogr_Delta SLATT_5 RVT-UG17 INT_P4_C PRK09692 Feature: gene Location: 176876-177148 bp Ori: CTT91152.1 Feature: domain Description: Ogr_Delta Location: 176900-177035 bp Feature: domain Description: Ogr_Delta Location: 1 76900-1 77035 bp Feature: gene Location: 177690-178253 bp Ori: CTT91162.1 Feature: domain Description: SLATT_5 Location: 177708-178236 bp Feature: domain Description: SLATT_5 Location: 1 77708-1 78236 bp Feature: gene Location: 178253-179587 bp Ori: CTT91170.1 Gene: ltrA Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 178481-179084 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 78481 -1 79084 bp Feature: gene Location: 179568-180365 bp Ori: CTT91181.1 Gene: intS_1 Feature: domain Description: INT_P4_C Location: 179814-180348 bp Feature: domain Description: INT_P4_C Location: 1 7981 4-1 80348 bp Feature: gene Location: 180495-180743 bp Ori: CTT91193.1 Gene: intA_1 Feature: domain Description: PRK09692 Location: 180504-180738 bp Feature: domain Description: PRK09692 Location: 1 80504-1 80738 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ogr_Delta (pfam04606), SLATT_5 (pfam18160), RVT-UG17, INT_P4_C (cd00801), PRK09692 (Integrase; provisional)