myRT

myRT report for GCA_001278345.1_ASM127834v1

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Seq: LIYA01000003.1 Gardnerella vaginalis strain 14019_MetR contig00003, whole genome shotgun sequence (323512 bp)
Overview 1 RT 1: 318294-323018 bp Neighborhood of RT #1 [318294, 323056] Nudix_Hydrolase_29 COG1373 RVT-UG15 COG2865 ParE_toxin Feature: gene Location: 318294-318779 bp Ori: KOS08859.1 Feature: domain Description: Nudix_Hydrolase_29 Location: 318339-318720 bp Feature: domain Description: Nudix_Hydrolase_29 Location: 31 8339-31 8720 bp Feature: gene Location: 318783-319037 bp Ori: KOS08860.1 Feature: domain Description: COG1373 Location: 318810-319029 bp Feature: domain Description: COG1 373 Location: 31 881 0-31 9029 bp Feature: gene Location: 319310-320839 bp Ori: KOS08861.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 319763-320162 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 31 9763-3201 62 bp Feature: gene Location: 320849-322264 bp Ori: KOS08862.1 Feature: domain Description: COG2865 Location: 320852-322259 bp Feature: domain Description: COG2865 Location: 320852-322259 bp Feature: gene Location: 322733-323056 bp Ori: KOS08863.1 Feature: domain Description: ParE_toxin Location: 322751-323018 bp Feature: domain Description: ParE_toxin Location: 322751 -32301 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nudix_Hydrolase_29 (cd04688), COG1373 (Predicted ATPase, AAA+ superfamily ), RVT-UG15, COG2865 (Predicted transcriptional regulator, contains HTH domain ), ParE_toxin (pfam05016)