myRT

myRT report for GCA_001280705.1_ASM128070v1

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Seq: LIRS01000109.1 Vibrio parahaemolyticus strain HS-06-05 contig109, whole genome shotgun sequence (116222 bp)
Overview 1 RT 1: 221-8482 bp Neighborhood of RT #1 [221, 8482] xerS INT_C_like_1 RVT-UG8 RVT-UG3 Feature: gene Location: 221-1492 bp Ori: KOY26724.1 Feature: domain Description: xerS Location: 752-869 bp Feature: domain Description: xerS Location: 752-869 bp Feature: domain Description: INT_C_like_1 Location: 905-1427 bp Feature: domain Description: INT_C_like_1 Location: 905-1 427 bp Feature: gene Location: 1873-3870 bp Ori: KOY26725.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2404-2842 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2404-2842 bp Feature: gene Location: 3863-5125 bp Ori: KOY26726.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 4145-4676 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 41 45-4676 bp Feature: gene Location: 5231-5626 bp Feature: gene Location: 7097-8482 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT xerS (PRK05084), INT_C_like_1 (cd01184), RVT-UG8, RVT-UG3

Seq: LIRS01000117.1 Vibrio parahaemolyticus strain HS-06-05 contig117, whole genome shotgun sequence (12673 bp)
Overview 1 RT 1: 3554-11016 bp Neighborhood of RT #1 [3554, 11016] SpoVK Peptidases_S8_Subtilisin_like_2 RVT-UG7 Feature: gene Location: 3554-4534 bp Ori: KOY25085.1 Feature: domain Description: SpoVK Location: 3746-4445 bp Feature: domain Description: SpoVK Location: 3746-4445 bp Feature: gene Location: 4546-7086 bp Ori: KOY25086.1 Feature: domain Description: Peptidases_S8_Subtilisin_like_2 Location: 5431-6340 bp Feature: domain Description: Peptidases_S8_Subtilisin_like_2 Location: 5431-6340 bp Feature: gene Location: 7274-8911 bp Ori: KOY25087.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 7709-8111 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 7709-8111 bp Feature: gene Location: 8899-9645 bp Feature: gene Location: 9778-11016 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SpoVK (COG0464), Peptidases_S8_Subtilisin_like_2 (cd04847), RVT-UG7

Seq: LIRS01000151.1 Vibrio parahaemolyticus strain HS-06-05 contig151, whole genome shotgun sequence (6719 bp)
Overview 1 RT 1: 737-3484 bp Neighborhood of RT #1 [737, 3484] RVT-Retrons Feature: gene Location: 737-1936 bp Ori: KOY19392.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 884-1466 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 884-1466 bp Feature: gene Location: 1914-2642 bp Feature: gene Location: 2762-3484 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons