myRT

myRT report for GCA_001281525.1_ASM128152v1

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Seq: LGCI01000010.1 Lysinibacillus macroides strain DSM 54 Scaffold2, whole genome shotgun sequence (1112050 bp)
Overview 1 RT 1: 969464-977756 bp Neighborhood of RT #1 [969464, 977881] BtuF RVT-GII GIIM PRK13354 MrcB Feature: gene Location: 969464-970267 bp Ori: KOY81332.1 Feature: domain Description: BtuF Location: 969467-970217 bp Feature: domain Description: BtuF Location: 969467-97021 7 bp Feature: gene Location: 970403-971290 bp Feature: gene Location: 971397-972671 bp Ori: KOY81334.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 971598-972213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 971 598-97221 3 bp Feature: domain Description: GIIM Note: maturase Location: 972273-972483 bp Feature: domain Description: GIIM Note: maturase Location: 972273-972483 bp Feature: gene Location: 973228-974496 bp Ori: KOY81335.1 Feature: domain Description: PRK13354 Location: 973237-974488 bp Feature: domain Description: PRK1 3354 Location: 973237-974488 bp Feature: gene Location: 974891-977881 bp Ori: KOY81336.1 Feature: domain Description: MrcB Location: 974981-977756 bp Feature: domain Description: MrcB Location: 974981 -977756 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BtuF (cd01144), RVT-GII, GIIM (pfam08388), PRK13354 (tyrosyl-tRNA synthetase; Provisional), MrcB (COG0744)

Seq: LGCI01000008.1 Lysinibacillus macroides strain DSM 54 Scaffold4, whole genome shotgun sequence (373654 bp)
Overview 1 RT 1: 252282-258570 bp Neighborhood of RT #1 [252282, 258638] HTH_17 HTH_17 RVT-GII YbjD YbjD DEXQc_UvrD DEXQc_UvrD UvrD Feature: gene Location: 252282-252518 bp Feature: gene Location: 252724-253473 bp Ori: KOY81890.1 Feature: domain Description: HTH_17 Location: 252847-252976 bp Feature: domain Description: HTH_17 Location: 2 52 847-2 52 976 bp Feature: domain Description: HTH_17 Location: 253198-253330 bp Feature: domain Description: HTH_17 Location: 2 53198-2 53330 bp Feature: gene Location: 254290-255717 bp Ori: KOY81891.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 254572-255235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 54572 -2 552 35 bp Feature: gene Location: 255902-257515 bp Ori: KOY81892.1 Feature: domain Description: YbjD Location: 255905-256499 bp Feature: domain Description: YbjD Location: 2 55905-2 56499 bp Feature: domain Description: YbjD Location: 256712-257321 bp Feature: domain Description: YbjD Location: 2 56712 -2 5732 1 bp Feature: gene Location: 257499-258638 bp Ori: KOY81893.1 Feature: domain Description: DEXQc_UvrD Location: 257514-257664 bp Feature: domain Description: DEXQc_UvrD Location: 2 57514-2 57664 bp Feature: domain Description: DEXQc_UvrD Location: 257853-258066 bp Feature: domain Description: DEXQc_UvrD Location: 2 57853-2 58066 bp Feature: domain Description: UvrD Location: 258396-258570 bp Feature: domain Description: UvrD Location: 2 58396-2 58570 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), RVT-GII, YbjD (COG3593), DEXQc_UvrD (cd17932), UvrD (COG0210)

Seq: LGCI01000014.1 Lysinibacillus macroides strain DSM 54 Scaffold5, whole genome shotgun sequence (332266 bp)
Overview 1 RT 1: 144729-156190 bp Neighborhood of RT #1 [144729, 156222] YeeA YeeA YeeA RVT-UNC TIGR02687 Feature: gene Location: 144729-148301 bp Feature: gene Location: 148313-151801 bp Ori: KOY80018.1 Feature: domain Description: YeeA Location: 148934-149411 bp Feature: domain Description: YeeA Location: 14893 4-149411 bp Feature: domain Description: YeeA Location: 149765-150275 bp Feature: domain Description: YeeA Location: 149765-150275 bp Feature: domain Description: YeeA Location: 151208-151760 bp Feature: domain Description: YeeA Location: 151208-151760 bp Feature: gene Location: 151905-152825 bp Ori: KOY80019.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 152295-152730 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 152295-15273 0 bp Feature: gene Location: 152897-153436 bp Feature: gene Location: 153664-156222 bp Ori: KOY80021.1 Feature: domain Description: TIGR02687 Location: 153724-156190 bp Feature: domain Description: TIGR02687 Location: 153 724-156190 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeeA (COG1002), RVT-AbiK/RVT-UG12/RVT-UG15/RVT-UG8(RVT-UNC), TIGR02687 (TIGR02687 family protein)