myRT

myRT report for GCA_001283945.1_7790_1_87

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Seq: CYCN01000002.1 Escherichia coli genome assembly 7790_1#87, scaffold ERS085420SCcontig000002, whole genome shotgun sequence (320379 bp)
Overview 1 RT 1: 163884-170003 bp Neighborhood of RT #1 [163884, 170893] Q RVT-AbiP2 Phage_GPA Feature: gene Location: 163884-164918 bp Ori: CTU49186.1 Feature: domain Description: Q Location: 163887-164910 bp Feature: domain Description: Q Location: 1 63887-1 6491 0 bp Feature: gene Location: 165111-166097 bp Feature: gene Location: 166585-168129 bp Ori: CTU49228.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 167002-167455 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 67002-1 67455 bp Feature: gene Location: 168295-168513 bp Feature: gene Location: 168617-170893 bp Ori: CTU49266.1 Feature: domain Description: Phage_GPA Location: 169016-170003 bp Feature: domain Description: Phage_GPA Location: 1 6901 6-1 70003 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), RVT-AbiP2, Phage_GPA (pfam05840)

Seq: CYCN01000017.1 Escherichia coli genome assembly 7790_1#87, scaffold ERS085420SCcontig000017, whole genome shotgun sequence (103972 bp)
Overview 1 RT 1: 46709-53087 bp Neighborhood of RT #1 [46709, 53107] XdhC PBP2_CrgA_like_5 RVT-UG8 RVT-UG3 PRK09678 Psu Feature: gene Location: 46709-47665 bp Ori: CTV54142.1 Feature: domain Description: XdhC Location: 46787-47642 bp Feature: domain Description: XdhC Location: 46787-47642 bp Feature: gene Location: 47644-48054 bp Ori: CTV54170.1 Gene: yagP Feature: domain Description: PBP2_CrgA_like_5 Location: 47716-48028 bp Feature: domain Description: PBP2 _CrgA_like_5 Location: 47716-4802 8 bp Feature: gene Location: 48597-50615 bp Ori: CTV54221.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 49170-49623 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 49170-4962 3 bp Feature: gene Location: 50606-51883 bp Ori: CTV54262.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 50894-51389 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 50894-51389 bp Feature: gene Location: 52278-52550 bp Ori: CTV54297.1 Feature: domain Description: PRK09678 Location: 52287-52452 bp Feature: domain Description: PRK09678 Location: 52 2 87-52 452 bp Feature: gene Location: 52556-53107 bp Ori: CTV54338.1 Feature: domain Description: Psu Location: 52577-53087 bp Feature: domain Description: Psu Location: 52 577-53087 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XdhC (COG1975), PBP2_CrgA_like_5 (cd08474), RVT-UG8, RVT-UG3, PRK09678 (DNA-binding transcriptional regulator; Provisional), Psu (pfam07455)