myRT

myRT report for GCA_001284505.1_7748_7_26

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Seq: CYAZ01000078.1 Escherichia coli genome assembly 7748_7#26, scaffold ERS085359SCcontig000078, whole genome shotgun sequence (12069 bp)
Overview 1 RT 1: 7130-11653 bp Neighborhood of RT #1 [7130, 11718] fecE RVT-GII GIIM PHA02517 Feature: gene Location: 7130-7897 bp Feature: domain Description: fecE Location: 7133-7895 bp Feature: domain Description: fecE Location: 71 33-7895 bp Feature: gene Location: 8456-8713 bp Feature: gene Location: 9364-10887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9637-10369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9637-1 0369 bp Feature: domain Description: GIIM Note: maturase Location: 10444-10642 bp Feature: domain Description: GIIM Note: maturase Location: 1 0444-1 0642 bp Feature: gene Location: 11479-11718 bp Feature: domain Description: PHA02517 Location: 11482-11653 bp Feature: domain Description: PHA0251 7 Location: 1 1 482-1 1 653 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), fecE (PRK11231), RVT-GII, GIIM (pfam08388)

Seq: CYAZ01000017.1 Escherichia coli genome assembly 7748_7#26, scaffold ERS085359SCcontig000017, whole genome shotgun sequence (82381 bp)
Overview 1 RT 1: 78142-82244 bp Neighborhood of RT #1 [78142, 82282] PRK15011 COG3943 RVT-Retrons TIR_2 Feature: gene Location: 78142-79326 bp Feature: domain Description: PRK15011 Location: 78151-79324 bp Feature: domain Description: PRK15011 Location: 78151-7932 4 bp Feature: gene Location: 79713-79853 bp Feature: domain Description: COG3943 Location: 79716-79845 bp Feature: domain Description: COG3943 Location: 79716-79845 bp Feature: gene Location: 80675-82282 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 80966-81563 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 80966-81563 bp Feature: domain Description: TIR_2 Location: 81887-82244 bp Feature: domain Description: TIR_2 Location: 81887-82 2 44 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15011 (sugar efflux transporter SetB), COG3943 (Uncharacterized conserved protein ), RVT-Retrons, TIR_2 (pfam13676)