myRT

myRT report for GCA_001284545.1_7790_1_53

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Seq: CYBM01000044.1 Escherichia coli genome assembly 7790_1#53, scaffold ERS085386SCcontig000044, whole genome shotgun sequence (22216 bp)
Overview 1 RT 1: 2819-7346 bp Neighborhood of RT #1 [2819, 7354] HTH_XRE RVT-Retrons FRG Q Feature: gene Location: 2819-3061 bp Feature: gene Location: 3098-3418 bp Ori: CTU18154.1 Feature: domain Description: HTH_XRE Location: 3113-3272 bp Feature: domain Description: HTH_XRE Location: 31 1 3-3272 bp Feature: gene Location: 3357-4334 bp Ori: CTU18163.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3564-4107 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3564-41 07 bp Feature: gene Location: 4443-5807 bp Ori: CTU18171.1 Feature: domain Description: FRG Location: 5010-5295 bp Feature: domain Description: FRG Location: 501 0-5295 bp Feature: gene Location: 6320-7354 bp Ori: CTU18173.1 Feature: domain Description: Q Location: 6323-7346 bp Feature: domain Description: Q Location: 6323-7346 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, FRG (smart00901), Q (PHA02536)

Seq: CYBM01000015.1 Escherichia coli genome assembly 7790_1#53, scaffold ERS085386SCcontig000015, whole genome shotgun sequence (116913 bp)
Overview 1 RT 1: 35228-43763 bp Neighborhood of RT #1 [35228, 43900] YbjD RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 35228-36733 bp Ori: CTT98451.1 Feature: domain Description: YbjD Location: 35867-36446 bp Feature: domain Description: YbjD Location: 35867-36446 bp Feature: gene Location: 37873-38343 bp Feature: gene Location: 38686-41895 bp Ori: CTT98470.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 39214-39706 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 392 14-39706 bp Feature: domain Description: nitrilase Location: 41209-41806 bp Feature: domain Description: nitrilase Location: 412 09-41806 bp Feature: gene Location: 42211-42993 bp Ori: CTT98478.1 Feature: domain Description: AbiEi_3_N Location: 42223-42484 bp Feature: domain Description: AbiEi_3_N Location: 42 2 2 3-42 484 bp Feature: domain Description: AbiEi_3 Location: 42496-42952 bp Feature: domain Description: AbiEi_3 Location: 42 496-42 952 bp Feature: gene Location: 42980-43900 bp Ori: CTT98485.1 Feature: domain Description: AbiEii Location: 43022-43763 bp Feature: domain Description: AbiEii Location: 4302 2 -43763 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjD (COG3593), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)