myRT

myRT report for GCA_001284565.1_7790_1_86

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Seq: CYCL01000002.1 Escherichia coli genome assembly 7790_1#86, scaffold ERS085419SCcontig000002, whole genome shotgun sequence (320282 bp)
Overview 1 RT 1: 163763-169882 bp Neighborhood of RT #1 [163763, 170772] Q RVT-AbiP2 Phage_GPA Feature: gene Location: 163763-164797 bp Ori: CTU46967.1 Feature: domain Description: Q Location: 163766-164789 bp Feature: domain Description: Q Location: 1 63766-1 64789 bp Feature: gene Location: 164990-165976 bp Feature: gene Location: 166464-168008 bp Ori: CTU46997.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 166881-167334 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 66881 -1 67334 bp Feature: gene Location: 168174-168392 bp Feature: gene Location: 168496-170772 bp Ori: CTU47022.1 Feature: domain Description: Phage_GPA Location: 168895-169882 bp Feature: domain Description: Phage_GPA Location: 1 68895-1 69882 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), RVT-AbiP2, Phage_GPA (pfam05840)

Seq: CYCL01000017.1 Escherichia coli genome assembly 7790_1#86, scaffold ERS085419SCcontig000017, whole genome shotgun sequence (104028 bp)
Overview 1 RT 1: 46761-53139 bp Neighborhood of RT #1 [46761, 53159] XdhC PBP2_CrgA_like_5 RVT-UG8 RVT-UG3 PRK09678 Psu Feature: gene Location: 46761-47717 bp Ori: CTV41875.1 Feature: domain Description: XdhC Location: 46839-47694 bp Feature: domain Description: XdhC Location: 46839-47694 bp Feature: gene Location: 47696-48106 bp Ori: CTV41917.1 Gene: yagP Feature: domain Description: PBP2_CrgA_like_5 Location: 47768-48080 bp Feature: domain Description: PBP2 _CrgA_like_5 Location: 47768-48080 bp Feature: gene Location: 48649-50667 bp Ori: CTV41939.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 49222-49675 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 492 2 2 -49675 bp Feature: gene Location: 50658-51935 bp Ori: CTV41978.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 50946-51441 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 50946-51441 bp Feature: gene Location: 52330-52602 bp Ori: CTV42017.1 Feature: domain Description: PRK09678 Location: 52339-52504 bp Feature: domain Description: PRK09678 Location: 52 339-52 504 bp Feature: gene Location: 52608-53159 bp Ori: CTV42066.1 Feature: domain Description: Psu Location: 52629-53139 bp Feature: domain Description: Psu Location: 52 62 9-53139 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XdhC (COG1975), PBP2_CrgA_like_5 (cd08474), RVT-UG8, RVT-UG3, PRK09678 (DNA-binding transcriptional regulator; Provisional), Psu (pfam07455)