myRT

myRT report for GCA_001284925.1_7790_1_88

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Seq: CYDD01000044.1 Escherichia coli genome assembly 7790_1#88, scaffold ERS085421SCcontig000044, whole genome shotgun sequence (39838 bp)
Overview 1 RT 1: 7416-12539 bp Neighborhood of RT #1 [7416, 12550] fecE RVT-GII GIIM PHA02517 InsE Feature: gene Location: 7416-8183 bp Feature: domain Description: fecE Location: 7419-8181 bp Feature: domain Description: fecE Location: 741 9-81 81 bp Feature: gene Location: 8743-9000 bp Feature: gene Location: 9651-11174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9924-10656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9924-1 0656 bp Feature: domain Description: GIIM Note: maturase Location: 10731-10929 bp Feature: domain Description: GIIM Note: maturase Location: 1 0731 -1 0929 bp Feature: gene Location: 11766-12005 bp Feature: domain Description: PHA02517 Location: 11769-11940 bp Feature: domain Description: PHA0251 7 Location: 1 1 769-1 1 940 bp Feature: gene Location: 12218-12550 bp Feature: domain Description: InsE Location: 12257-12539 bp Feature: domain Description: InsE Location: 1 2257-1 2539 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), fecE (PRK11231), RVT-GII, GIIM (pfam08388)

Seq: CYDD01000029.1 Escherichia coli genome assembly 7790_1#88, scaffold ERS085421SCcontig000029, whole genome shotgun sequence (60144 bp)
Overview 1 RT 1: 4424-9906 bp Neighborhood of RT #1 [4424, 9911] DinI RVT-Retrons Q P Feature: gene Location: 4424-4612 bp Feature: gene Location: 4623-4856 bp Feature: domain Description: DinI Location: 4665-4851 bp Feature: domain Description: DinI Location: 4665-4851 bp Feature: gene Location: 5138-7078 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5462-6086 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5462 -6086 bp Feature: gene Location: 7120-8145 bp Feature: domain Description: Q Location: 7126-8140 bp Feature: domain Description: Q Location: 712 6-8140 bp Feature: gene Location: 8145-9911 bp Feature: domain Description: P Location: 8172-9906 bp Feature: domain Description: P Location: 8172 -9906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-Retrons, Q (PHA02536), P (PHA02535)

Seq: CYDD01000077.1 Escherichia coli genome assembly 7790_1#88, scaffold ERS085421SCcontig000077, whole genome shotgun sequence (18766 bp)
Overview 1 RT 1: 41-2661 bp Neighborhood of RT #1 [41, 2661] RVT-GII Feature: gene Location: 41-325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44-290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44-290 bp Feature: gene Location: 1869-2303 bp Feature: gene Location: 2395-2661 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII