myRT

myRT report for GCA_001285185.1_7748_7_6

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Seq: CYBC01000033.1 Escherichia coli genome assembly 7748_7#6, scaffold ERS085339SCcontig000033, whole genome shotgun sequence (29478 bp)
Overview 1 RT 1: 22661-28333 bp Neighborhood of RT #1 [22661, 28333] PRK10597 DinI RVT-Retrons TIR_2 Phage_fiber_2 Phage_fiber_2 Phage_fiber_2 Collar Phage_fiber Phage_fiber Phage_fiber Phage_fiber Phage_fiber Feature: gene Location: 22661-22759 bp Feature: domain Description: PRK10597 Location: 22664-22742 bp Feature: domain Description: PRK1 0597 Location: 22664-22742 bp Feature: gene Location: 22722-22922 bp Feature: domain Description: DinI Location: 22731-22902 bp Feature: domain Description: DinI Location: 22731 -22902 bp Feature: gene Location: 23258-24886 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23573-24164 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23573-241 64 bp Feature: domain Description: TIR_2 Location: 24491-24779 bp Feature: domain Description: TIR_2 Location: 24491 -24779 bp Feature: gene Location: 25915-27465 bp Feature: domain Description: Phage_fiber_2 Location: 25936-26056 bp Feature: domain Description: Phage_fiber_2 Location: 25936-26056 bp Feature: domain Description: Phage_fiber_2 Location: 26068-26188 bp Feature: domain Description: Phage_fiber_2 Location: 26068-261 88 bp Feature: domain Description: Phage_fiber_2 Location: 26200-26317 bp Feature: domain Description: Phage_fiber_2 Location: 26200-2631 7 bp Feature: domain Description: Collar Location: 26833-26971 bp Feature: domain Description: Collar Location: 26833-26971 bp Feature: domain Description: Phage_fiber Location: 27022-27061 bp Feature: domain Description: Phage_fiber Location: 27022-27061 bp Feature: domain Description: Phage_fiber Location: 27118-27157 bp Feature: domain Description: Phage_fiber Location: 271 1 8-271 57 bp Feature: domain Description: Phage_fiber Location: 27163-27193 bp Feature: domain Description: Phage_fiber Location: 271 63-271 93 bp Feature: domain Description: Phage_fiber Location: 27268-27307 bp Feature: domain Description: Phage_fiber Location: 27268-27307 bp Feature: domain Description: Phage_fiber Location: 27313-27346 bp Feature: domain Description: Phage_fiber Location: 2731 3-27346 bp Feature: gene Location: 27596-28333 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10597 (DNA damage-inducible protein I; Provisional), DinI (pfam06183), RVT-Retrons, TIR_2 (pfam13676), Phage_fiber_2 (pfam03406), Collar (pfam07484), Phage_fiber (pfam03335)