myRT

myRT report for GCA_001285245.1_8205_3_18

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Seq: CYDI01000022.1 Escherichia coli genome assembly 8205_3#18, scaffold ERS139215SCcontig000022, whole genome shotgun sequence (78698 bp)
Overview 1 RT 1: 54-5981 bp Neighborhood of RT #1 [54, 5983] Ogr_Delta Psu RVT-UG15 PRK09692 PRK11462 Feature: gene Location: 54-284 bp Ori: CTW34890.1 Feature: domain Description: Ogr_Delta Location: 102-180 bp Feature: domain Description: Ogr_Delta Location: 1 02-1 80 bp Feature: gene Location: 358-930 bp Ori: CTW34920.1 Feature: domain Description: Psu Location: 376-913 bp Feature: domain Description: Psu Location: 376-91 3 bp Feature: gene Location: 1254-2864 bp Ori: CTW34953.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 1662-2085 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 1 662-2085 bp Feature: gene Location: 2882-4051 bp Ori: CTW34984.1 Gene: intS_1 Feature: domain Description: PRK09692 Location: 2891-4034 bp Feature: domain Description: PRK09692 Location: 2891 -4034 bp Feature: gene Location: 4601-5983 bp Ori: CTW35039.1 Gene: yicJ Feature: domain Description: PRK11462 Location: 4604-5981 bp Feature: domain Description: PRK1 1 462 Location: 4604-5981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ogr_Delta (pfam04606), Psu (pfam07455), RVT-UG15, PRK09692 (Integrase; provisional), PRK11462 (putative transporter; Provisional)