myRT

myRT report for GCA_001285885.1_7790_1_94

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Seq: CYDG01000028.1 Escherichia coli genome assembly 7790_1#94, scaffold ERS085427SCcontig000028, whole genome shotgun sequence (60201 bp)
Overview 1 RT 1: 4362-9844 bp Neighborhood of RT #1 [4362, 9849] DinI RVT-Retrons Q P Feature: gene Location: 4362-4550 bp Feature: gene Location: 4561-4794 bp Feature: domain Description: DinI Location: 4603-4789 bp Feature: domain Description: DinI Location: 4603-4789 bp Feature: gene Location: 5076-7016 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5400-6024 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5400-6024 bp Feature: gene Location: 7058-8083 bp Feature: domain Description: Q Location: 7064-8078 bp Feature: domain Description: Q Location: 7064-8078 bp Feature: gene Location: 8083-9849 bp Feature: domain Description: P Location: 8110-9844 bp Feature: domain Description: P Location: 81 1 0-9844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-Retrons, Q (PHA02536), P (PHA02535)

Seq: CYDG01000165.1 Escherichia coli genome assembly 7790_1#94, scaffold ERS085427SCcontig000165, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 93-1371 bp Neighborhood of RT #1 [93, 1616] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CYDG01000193.1 Escherichia coli genome assembly 7790_1#94, scaffold ERS085427SCcontig000193, whole genome shotgun sequence (1260 bp)
Overview 1 RT 1: 547-1189 bp Neighborhood of RT #1 [547, 1224] RVT_N RVT-GII Feature: gene Location: 547-819 bp Feature: RT Description: RVT_N Location: 595-817 bp Feature: RT Description: RVT_N Location: 595-817 bp Feature: gene Location: 940-1224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 943-1189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 943 -1189 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII