myRT

myRT report for GCA_001292845.1_ASM129284v1

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Seq: LGSV01000152.1 Rhodococcus opacus strain 8 scaffold152, whole genome shotgun sequence (18406 bp)
Overview 1 RT 1: 5171-9088 bp Neighborhood of RT #1 [5171, 9330] DDE_Tnp_1_4 RVT_N RVT-GII GIIM HTH_Tnp_1 HTH_21 Feature: gene Location: 5171-5356 bp Feature: gene Location: 5413-6228 bp Feature: domain Description: DDE_Tnp_1_4 Location: 5587-6037 bp Feature: domain Description: DDE_Tnp_1 _4 Location: 5587-6037 bp Feature: gene Location: 6149-7927 bp Feature: RT Description: RVT_N Location: 6224-6467 bp Feature: RT Description: RVT_N Location: 6224-6467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6521-7178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6521 -71 78 bp Feature: domain Description: GIIM Note: maturase Location: 7229-7463 bp Feature: domain Description: GIIM Note: maturase Location: 7229-7463 bp Feature: gene Location: 8501-8821 bp Feature: domain Description: HTH_Tnp_1 Location: 8504-8747 bp Feature: domain Description: HTH_Tnp_1 Location: 8504-8747 bp Feature: gene Location: 8875-9330 bp Feature: domain Description: HTH_21 Location: 8971-9088 bp Feature: domain Description: HTH_21 Location: 8971 -9088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_4 (pfam13701), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HTH_Tnp_1 (pfam01527), HTH_21 (pfam13276)