myRT

myRT report for GCA_001293245.1_Ssuis1606_v1.0

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Seq: LDOM01000009.1 Streptococcus suis strain ISU1606 Ssuis1606_c9, whole genome shotgun sequence (206013 bp)
Overview 1 RT 1: 82398-91582 bp Neighborhood of RT #1 [82398, 91582] Omega_Repress SF2_C_SNF RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Feature: gene Location: 82398-82568 bp Feature: domain Description: Omega_Repress Location: 82404-82524 bp Feature: domain Description: Omega_Repress Location: 82404-82524 bp Feature: gene Location: 82651-83094 bp Feature: domain Description: SF2_C_SNF Location: 82894-83041 bp Feature: domain Description: SF2_C_SNF Location: 82894-83041 bp Feature: gene Location: 83232-85010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83493-84285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83493-84285 bp Feature: domain Description: Intron_maturas2 Location: 84390-84621 bp Feature: domain Description: Intron_maturas2 Location: 84390-84621 bp Feature: domain Description: HNHc Note: nucleases Location: 84786-84972 bp Feature: domain Description: HNHc Note: nucleases Location: 84786-84972 bp Feature: gene Location: 85508-90982 bp Feature: domain Description: N6_Mtase Location: 87533-88124 bp Feature: domain Description: N6_Mtase Location: 87533-881 24 bp Feature: domain Description: COG4646 Location: 88715-90839 bp Feature: domain Description: COG4646 Location: 8871 5-90839 bp Feature: gene Location: 91031-91582 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Omega_Repress (pfam07764), SF2_C_SNF (cd18793), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )