myRT

myRT report for GCA_001293525.1_ASM129352v1

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Seq: BBYR01000068.1 Ideonella sakaiensis DNA, contig: ISCTG068, whole genome shotgun sequence (58775 bp)
Overview 1 RT 1: 31898-38820 bp Neighborhood of RT #1 [31898, 38831] PRK09692 RVT_N RVT-GII GIIM HNHc CitB QOR1 Feature: gene Location: 31898-33751 bp Feature: domain Description: PRK09692 Location: 31907-33116 bp Feature: domain Description: PRK09692 Location: 31 907-331 1 6 bp Feature: gene Location: 34153-34290 bp Feature: gene Location: 34362-35990 bp Feature: RT Description: RVT_N Location: 34410-34653 bp Feature: RT Description: RVT_N Location: 3441 0-34653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34698-35337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34698-35337 bp Feature: domain Description: GIIM Note: maturase Location: 35388-35622 bp Feature: domain Description: GIIM Note: maturase Location: 35388-35622 bp Feature: domain Description: HNHc Note: nucleases Location: 35829-35979 bp Feature: domain Description: HNHc Note: nucleases Location: 35829-35979 bp Feature: gene Location: 36994-37701 bp Feature: domain Description: CitB Location: 36997-37699 bp Feature: domain Description: CitB Location: 36997-37699 bp Feature: gene Location: 37854-38831 bp Feature: domain Description: QOR1 Location: 37857-38820 bp Feature: domain Description: QOR1 Location: 37857-38820 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), CitB (TIGR02484), QOR1 (cd08241)

Seq: BBYR01000087.1 Ideonella sakaiensis DNA, contig: ISCTG087, whole genome shotgun sequence (1954 bp)
Overview 1 RT 1: 149-1253 bp Neighborhood of RT #1 [149, 1333] RVT-GII GIIM Feature: gene Location: 149-1333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 293-950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 93-950 bp Feature: domain Description: GIIM Note: maturase Location: 1031-1253 bp Feature: domain Description: GIIM Note: maturase Location: 1031-12 53 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)