myRT

myRT report for GCA_001297245.1_ASM129724v1

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Seq: LJSR01000062.1 Rhizobium acidisoli strain FH23 Scaffold58_1, whole genome shotgun sequence (11848 bp)
Overview 1 RT 1: 6030-11407 bp Neighborhood of RT #1 [6030, 11407] DarT RVT-UG20 Feature: gene Location: 6030-6833 bp Ori: KPH04298.1 Feature: domain Description: DarT Location: 6063-6519 bp Feature: domain Description: DarT Location: 6063-651 9 bp Feature: gene Location: 7130-7441 bp Feature: gene Location: 7659-8720 bp Ori: KPH04300.1 Feature: RT Description: RVT-UG20 Note: UG20 RT Location: 7662-7971 bp Feature: RT Description: RVT-UG20 Note: UG20 RT Location: 7662-7971 bp Feature: gene Location: 9616-10650 bp Feature: gene Location: 10922-11407 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DarT, RVT-UG20

Seq: LJSR01000013.1 Rhizobium acidisoli strain FH23 Scaffold12_1, whole genome shotgun sequence (204773 bp)
Overview 1 RT 1: 123053-128971 bp Neighborhood of RT #1 [123053, 128976] WecC RVT-GII GIIM DUF3095 Methyltransf_17 Feature: gene Location: 123053-123406 bp Feature: gene Location: 123863-125200 bp Ori: KPH06977.1 Feature: domain Description: WecC Location: 123893-125195 bp Feature: domain Description: WecC Location: 12 3893-12 5195 bp Feature: gene Location: 125737-127095 bp Ori: KPH06978.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 126064-126676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 6064-12 6676 bp Feature: domain Description: GIIM Note: maturase Location: 126730-126931 bp Feature: domain Description: GIIM Note: maturase Location: 12 6730-12 6931 bp Feature: gene Location: 127197-128372 bp Ori: KPH06979.1 Feature: domain Description: DUF3095 Location: 127224-128334 bp Feature: domain Description: DUF3095 Location: 12 72 2 4-12 8334 bp Feature: gene Location: 128497-128976 bp Ori: KPH06980.1 Feature: domain Description: Methyltransf_17 Location: 128500-128971 bp Feature: domain Description: Methyltransf_17 Location: 12 8500-12 8971 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WecC (COG0677), RVT-GII, GIIM (pfam08388), DUF3095 (pfam11294), Methyltransf_17 (pfam12692)

Seq: LJSR01000119.1 Rhizobium acidisoli strain FH23 Scaffold113_1, whole genome shotgun sequence (703 bp)
Overview 1 RT 1: 21-312 bp Neighborhood of RT #1 [21, 323] RVT-GII Feature: gene Location: 21-323 bp Ori: KPH04137.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 237-312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 7-3 12 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII