myRT

myRT report for GCA_001298555.1_Actinobacteria.strain_OV450_v1.0

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Seq: LJCW01000163.1 Actinobacteria bacterium OV450 ctg249, whole genome shotgun sequence (5892 bp)
Overview 1 RT 1: 85-2078 bp Neighborhood of RT #1 [85, 2197] RVT-GII GIIM DDE_3 Feature: gene Location: 85-936 bp Ori: KPI16406.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94-502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94-502 bp Feature: domain Description: GIIM Note: maturase Location: 571-793 bp Feature: domain Description: GIIM Note: maturase Location: 571 -793 bp Feature: gene Location: 1041-1688 bp Feature: gene Location: 1751-2197 bp Ori: KPI16408.1 Feature: domain Description: DDE_3 Location: 1850-2078 bp Feature: domain Description: DDE_3 Location: 1 850-2078 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_3 (pfam13358)

Seq: LJCW01000261.1 Actinobacteria bacterium OV450 ctg337, whole genome shotgun sequence (1969 bp)
Overview 1 RT 1: 1-1900 bp Neighborhood of RT #1 [1, 1953] HTH_Tnp_4 RVT-GII Feature: gene Location: 1-304 bp Ori: KPI11261.1 Feature: domain Description: HTH_Tnp_4 Location: 13-148 bp Feature: domain Description: HTH_Tnp_4 Location: 13-148 bp Feature: gene Location: 1297-1953 bp Ori: KPI11262.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1621-1900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162 1-1900 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_4 (pfam13613), RVT-GII

Seq: LJCW01000282.1 Actinobacteria bacterium OV450 ctg357, whole genome shotgun sequence (1394 bp)
Overview 1 RT 1: 1-1394 bp Neighborhood of RT #1 [1, 1394] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1-172 bp Feature: gene Location: 350-1252 bp Ori: KPI10691.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 383-590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 83 -590 bp Feature: domain Description: Intron_maturas2 Location: 647-857 bp Feature: domain Description: Intron_maturas2 Location: 647-857 bp Feature: domain Description: HNHc Note: nucleases Location: 1052-1208 bp Feature: domain Description: HNHc Note: nucleases Location: 1052-1208 bp Feature: gene Location: 1249-1394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: LJCW01000237.1 Actinobacteria bacterium OV450 ctg315, whole genome shotgun sequence (2219 bp)
Overview 1 RT 1: 707-2039 bp Neighborhood of RT #1 [707, 2219] RVT-GII GIIM Feature: gene Location: 707-2219 bp Ori: KPI12157.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1049-1745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104 9-174 5 bp Feature: domain Description: GIIM Note: maturase Location: 1817-2039 bp Feature: domain Description: GIIM Note: maturase Location: 1817-2039 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)