myRT

myRT report for GCA_001299055.1_11861_6_1

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Seq: CYTI01000016.1 Achromobacter sp. 2789STDY5608606 genome assembly, contig: ERS369981SCcontig000016, whole genome shotgun sequence (180287 bp)
Overview 1 RT 1: 7029-11490 bp Neighborhood of RT #1 [7029, 11507] ParD HipB RVT-GII GIIM HNHc DUF2958 DUF2958 Feature: gene Location: 7029-7313 bp Feature: domain Description: ParD Location: 7050-7287 bp Feature: domain Description: ParD Location: 7050-7287 bp Feature: gene Location: 7445-7729 bp Feature: domain Description: HipB Location: 7463-7655 bp Feature: domain Description: HipB Location: 7463-7655 bp Feature: gene Location: 8885-10264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8909-9557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8909-9557 bp Feature: domain Description: GIIM Note: maturase Location: 9608-9842 bp Feature: domain Description: GIIM Note: maturase Location: 9608-9842 bp Feature: domain Description: HNHc Note: nucleases Location: 10061-10211 bp Feature: domain Description: HNHc Note: nucleases Location: 1 0061 -1 021 1 bp Feature: gene Location: 10649-10999 bp Feature: domain Description: DUF2958 Location: 10670-10994 bp Feature: domain Description: DUF2958 Location: 1 0670-1 0994 bp Feature: gene Location: 11160-11507 bp Feature: domain Description: DUF2958 Location: 11169-11490 bp Feature: domain Description: DUF2958 Location: 1 1 1 69-1 1 490 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2958 (pfam11171), ParD (pfam09386), HipB (COG1396), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: CYTI01000014.1 Achromobacter sp. 2789STDY5608606 genome assembly, contig: ERS369981SCcontig000014, whole genome shotgun sequence (195398 bp)
Overview 1 RT 1: 24637-30596 bp Neighborhood of RT #1 [24637, 30596] PBP2_Bug27 argD RVT-Retrons Feature: gene Location: 24637-25602 bp Feature: domain Description: PBP2_Bug27 Location: 24712-25582 bp Feature: domain Description: PBP2 _Bug2 7 Location: 2 4712 -2 5582 bp Feature: gene Location: 25816-27009 bp Feature: domain Description: argD Location: 25819-26998 bp Feature: domain Description: argD Location: 2 5819-2 6998 bp Feature: gene Location: 27148-28059 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27253-27838 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 72 53-2 7838 bp Feature: gene Location: 28056-28988 bp Feature: gene Location: 29637-30596 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_Bug27 (cd13578), argD (TIGR00707), RVT-Retrons

Seq: CYTI01000008.1 Achromobacter sp. 2789STDY5608606 genome assembly, contig: ERS369981SCcontig000008, whole genome shotgun sequence (292081 bp)
Overview 1 RT 1: 201838-207031 bp Neighborhood of RT #1 [201838, 207129] PBP2_BztA YXWGXW RVT-Retrons TIR_2 Feature: gene Location: 201838-202854 bp Feature: domain Description: PBP2_BztA Location: 201919-202621 bp Feature: domain Description: PBP2_BztA Location: 201919-202621 bp Feature: gene Location: 203146-203469 bp Feature: domain Description: YXWGXW Location: 203302-203377 bp Feature: domain Description: YXWGXW Location: 203 3 02-203 3 77 bp Feature: gene Location: 204079-205047 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 204199-204739 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 204199-20473 9 bp Feature: gene Location: 205531-206385 bp Feature: gene Location: 206416-207129 bp Feature: domain Description: TIR_2 Location: 206737-207031 bp Feature: domain Description: TIR_2 Location: 20673 7-20703 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_BztA (cd13692), YXWGXW (pfam12779), RVT-Retrons, TIR_2 (pfam13676)