myRT

myRT report for GCA_001299315.1_11861_6_73

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Seq: CYUC01000090.1 Achromobacter sp. ATCC35328 genome assembly, contig: ERS372666SCcontig000090, whole genome shotgun sequence (7895 bp)
Overview 1 RT 1: 88-4769 bp Neighborhood of RT #1 [88, 4792] DDE_Tnp_IS66 RVT-GII GIIM deoxyribose_mutarotase FucP Feature: gene Location: 88-939 bp Feature: domain Description: DDE_Tnp_IS66 Location: 91-898 bp Feature: domain Description: DDE_Tnp_IS66 Location: 91 -898 bp Feature: gene Location: 1401-2633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1602-2256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 602-2256 bp Feature: domain Description: GIIM Note: maturase Location: 2334-2556 bp Feature: domain Description: GIIM Note: maturase Location: 2334-2556 bp Feature: gene Location: 3072-3464 bp Feature: domain Description: deoxyribose_mutarotase Location: 3213-3453 bp Feature: domain Description: deoxyribose_mutarotase Location: 321 3-3453 bp Feature: gene Location: 3476-4792 bp Feature: domain Description: FucP Location: 3509-4769 bp Feature: domain Description: FucP Location: 3509-4769 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), deoxyribose_mutarotase (cd09269), FucP (COG0738), DDE_Tnp_IS66 (pfam03050)

Seq: CYUC01000007.1 Achromobacter sp. ATCC35328 genome assembly, contig: ERS372666SCcontig000007, whole genome shotgun sequence (130057 bp)
Overview 1 RT 1: 103186-108018 bp Neighborhood of RT #1 [103186, 108050] PRK09897 PHA02517 RVT-GII GIIM InsE TnpB_IS66 Feature: gene Location: 103186-103833 bp Feature: domain Description: PRK09897 Location: 103189-103672 bp Feature: domain Description: PRK09897 Location: 103189-103672 bp Feature: gene Location: 103715-104086 bp Feature: domain Description: PHA02517 Location: 103718-104084 bp Feature: domain Description: PHA02 517 Location: 103718-104084 bp Feature: gene Location: 104278-105801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104551-105283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104551-1052 83 bp Feature: domain Description: GIIM Note: maturase Location: 105358-105556 bp Feature: domain Description: GIIM Note: maturase Location: 105358-105556 bp Feature: gene Location: 107278-107703 bp Feature: domain Description: InsE Location: 107293-107683 bp Feature: domain Description: InsE Location: 1072 93-107683 bp Feature: gene Location: 107700-108050 bp Feature: domain Description: TnpB_IS66 Location: 107727-108018 bp Feature: domain Description: TnpB_IS66 Location: 10772 7-108018 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09897 (FAD-NAD(P)-binding protein), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), TnpB_IS66 (pfam05717)