myRT

myRT report for GCA_001306275.1_ASM130627v1

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Seq: LAPR01000004.1 Citromicrobium sp. JL1351 contig4, whole genome shotgun sequence (300553 bp)
Overview 1 RT 1: 13629-18967 bp Neighborhood of RT #1 [13629, 18967] HTH_XRE RVT-UNC PinE Feature: gene Location: 13629-14321 bp Ori: KPM15139.1 Feature: domain Description: HTH_XRE Location: 13668-13830 bp Feature: domain Description: HTH_XRE Location: 1 3668-1 3830 bp Feature: gene Location: 14342-14911 bp Feature: gene Location: 15616-16452 bp Ori: KPM15141.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 15727-16195 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1 5727-1 61 95 bp Feature: gene Location: 16432-17022 bp Ori: KPM15142.1 Feature: domain Description: PinE Location: 16435-17008 bp Feature: domain Description: PinE Location: 1 6435-1 7008 bp Feature: gene Location: 18098-18967 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-UG11/RVT-UG17/RVT-GII/RVT-UG19(RVT-UNC), PinE (COG1961)

Seq: LAPR01000003.1 Citromicrobium sp. JL1351 contig3, whole genome shotgun sequence (443307 bp)
Overview 1 RT 1: 377493-382479 bp Neighborhood of RT #1 [377493, 382481] PRK05467 HTH_XRE RVT-Retrons rpsL PRK05302 Feature: gene Location: 377493-378176 bp Ori: KPM16511.1 Feature: domain Description: PRK05467 Location: 377496-378171 bp Feature: domain Description: PRK05467 Location: 377496-378171 bp Feature: gene Location: 379636-379950 bp Ori: KPM16404.1 Feature: domain Description: HTH_XRE Location: 379663-379828 bp Feature: domain Description: HTH_XRE Location: 379663-37982 8 bp Feature: gene Location: 379937-380983 bp Ori: KPM16405.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 380111-380630 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 380111-380630 bp Feature: gene Location: 381497-381868 bp Ori: KPM16406.1 Feature: domain Description: rpsL Location: 381500-381866 bp Feature: domain Description: rpsL Location: 381500-381866 bp Feature: gene Location: 382011-382481 bp Ori: KPM16407.1 Feature: domain Description: PRK05302 Location: 382014-382479 bp Feature: domain Description: PRK05302 Location: 382 014-382 479 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05467 (Fe(II)-dependent oxygenase superfamily protein; Provisional), HTH_XRE (smart00530), RVT-Retrons, rpsL (PRK05163), PRK05302 (30S ribosomal protein S7; Validated)