myRT

myRT report for GCA_001306285.1_ASM130628v1

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Seq: LAIH01000009.1 Citromicrobium sp. JL31 contig9, whole genome shotgun sequence (168641 bp)
Overview 1 RT 1: 102794-107780 bp Neighborhood of RT #1 [102794, 107782] PRK05467 HTH_XRE RVT-Retrons rpsL PRK05302 Feature: gene Location: 102794-103477 bp Ori: KPM15572.1 Feature: domain Description: PRK05467 Location: 102797-103472 bp Feature: domain Description: PRK05467 Location: 1 02797-1 03472 bp Feature: gene Location: 104937-105251 bp Ori: KPM15497.1 Feature: domain Description: HTH_XRE Location: 104964-105129 bp Feature: domain Description: HTH_XRE Location: 1 04964-1 051 29 bp Feature: gene Location: 105238-106284 bp Ori: KPM15498.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 105412-105931 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 0541 2-1 05931 bp Feature: gene Location: 106798-107169 bp Ori: KPM15499.1 Feature: domain Description: rpsL Location: 106801-107167 bp Feature: domain Description: rpsL Location: 1 06801 -1 071 67 bp Feature: gene Location: 107312-107782 bp Ori: KPM15500.1 Feature: domain Description: PRK05302 Location: 107315-107780 bp Feature: domain Description: PRK05302 Location: 1 0731 5-1 07780 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05467 (Fe(II)-dependent oxygenase superfamily protein; Provisional), HTH_XRE (smart00530), RVT-Retrons, rpsL (PRK05163), PRK05302 (30S ribosomal protein S7; Validated)

Seq: LAIH01000005.1 Citromicrobium sp. JL31 contig5, whole genome shotgun sequence (286126 bp)
Overview 1 RT 1: 1-4525 bp Neighborhood of RT #1 [1, 4525] RVT-UNC PinE Feature: gene Location: 1-469 bp Feature: gene Location: 1174-2010 bp Ori: KPM19500.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 1285-1753 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 12 85-1753 bp Feature: gene Location: 1990-2580 bp Ori: KPM19501.1 Feature: domain Description: PinE Location: 1993-2566 bp Feature: domain Description: PinE Location: 1993-2 566 bp Feature: gene Location: 3656-4525 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-UG17/RVT-GII/RVT-UG19(RVT-UNC), PinE (COG1961)