myRT

myRT report for GCA_001306305.1_ASM130630v1

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Seq: LARQ01000006.1 Citromicrobium sp. JL2201 contig6, whole genome shotgun sequence (289636 bp)
Overview 1 RT 1: 281590-286437 bp Neighborhood of RT #1 [281590, 286928] PinE RVT-UNC HTH_XRE Feature: gene Location: 281590-282459 bp Feature: gene Location: 283535-284125 bp Ori: KPM26438.1 Feature: domain Description: PinE Location: 283538-284111 bp Feature: domain Description: PinE Location: 283538-2841 1 1 bp Feature: gene Location: 284105-284941 bp Ori: KPM26439.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 284216-284684 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 28421 6-284684 bp Feature: gene Location: 285646-286215 bp Feature: gene Location: 286236-286928 bp Ori: KPM26441.1 Feature: domain Description: HTH_XRE Location: 286275-286437 bp Feature: domain Description: HTH_XRE Location: 286275-286437 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-UG11/RVT-UG17/RVT-GII/RVT-UG19(RVT-UNC), HTH_XRE (smart00530)

Seq: LARQ01000013.1 Citromicrobium sp. JL2201 contig13, whole genome shotgun sequence (161025 bp)
Overview 1 RT 1: 60830-65813 bp Neighborhood of RT #1 [60830, 65818] PRK05302 rpsL RVT-Retrons HTH_XRE PRK05467 Feature: gene Location: 60830-61300 bp Ori: KPM21888.1 Feature: domain Description: PRK05302 Location: 60833-61298 bp Feature: domain Description: PRK05302 Location: 60833-612 98 bp Feature: gene Location: 61443-61814 bp Ori: KPM21889.1 Feature: domain Description: rpsL Location: 61446-61812 bp Feature: domain Description: rpsL Location: 61446-61812 bp Feature: gene Location: 62328-63374 bp Ori: KPM21890.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 62502-63021 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 62 502 -6302 1 bp Feature: gene Location: 63361-63675 bp Ori: KPM21891.1 Feature: domain Description: HTH_XRE Location: 63388-63553 bp Feature: domain Description: HTH_XRE Location: 63388-63553 bp Feature: gene Location: 65135-65818 bp Ori: KPM21978.1 Feature: domain Description: PRK05467 Location: 65138-65813 bp Feature: domain Description: PRK05467 Location: 65138-65813 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05302 (30S ribosomal protein S7; Validated), rpsL (PRK05163), RVT-Retrons, HTH_XRE (smart00530), PRK05467 (Fe(II)-dependent oxygenase superfamily protein; Provisional)