myRT

myRT report for GCA_001309615.1_ASM130961v1

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Seq: LECL01000116.1 Escherichia coli strain PARC450 483, whole genome shotgun sequence (2583 bp)
Overview 1 RT 1: 133-2279 bp Neighborhood of RT #1 [133, 2279] YhhI RVT-GII GIIM Feature: gene Location: 133-321 bp Ori: KPO34777.1 Feature: domain Description: YhhI Location: 136-307 bp Feature: domain Description: YhhI Location: 1 36-307 bp Feature: gene Location: 404-1654 bp Ori: KPO34775.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 608-1265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 608-1 265 bp Feature: domain Description: GIIM Note: maturase Location: 1346-1568 bp Feature: domain Description: GIIM Note: maturase Location: 1 346-1 568 bp Feature: gene Location: 2018-2158 bp Feature: gene Location: 2186-2279 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-GII, GIIM (pfam08388)

Seq: LECL01000001.1 Escherichia coli strain PARC450 467, whole genome shotgun sequence (89870 bp)
Overview 1 RT 1: 74848-80957 bp Neighborhood of RT #1 [74848, 81016] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase SfsB Feature: gene Location: 74848-75768 bp Ori: KPO43826.1 Feature: domain Description: AbiEii Location: 74890-75631 bp Feature: domain Description: AbiEii Location: 74890-75631 bp Feature: gene Location: 75755-76537 bp Ori: KPO43827.1 Feature: domain Description: AbiEi_3_N Location: 75767-76028 bp Feature: domain Description: AbiEi_3_N Location: 75767-7602 8 bp Feature: domain Description: AbiEi_3 Location: 76040-76496 bp Feature: domain Description: AbiEi_3 Location: 76040-76496 bp Feature: gene Location: 76853-80062 bp Ori: KPO43828.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 77381-77870 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 77381-77870 bp Feature: domain Description: nitrilase Location: 79376-79973 bp Feature: domain Description: nitrilase Location: 79376-79973 bp Feature: gene Location: 80409-80879 bp Feature: gene Location: 80876-81016 bp Ori: KPO43830.1 Feature: domain Description: SfsB Location: 80885-80957 bp Feature: domain Description: SfsB Location: 80885-80957 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), SfsB (COG3423)

Seq: LECL01000021.1 Escherichia coli strain PARC450 497, whole genome shotgun sequence (5942 bp)
Overview 1 RT 1: 472-3477 bp Neighborhood of RT #1 [472, 3477] RVT-GII GIIM Feature: gene Location: 472-843 bp Feature: gene Location: 758-1183 bp Feature: gene Location: 1152-2660 bp Ori: KPO42473.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1410-2142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1410-2142 bp Feature: domain Description: GIIM Note: maturase Location: 2217-2415 bp Feature: domain Description: GIIM Note: maturase Location: 2217-2415 bp Feature: gene Location: 3189-3308 bp Feature: gene Location: 3289-3477 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)