myRT

myRT report for GCA_001310455.1_ASM131045v1

Download annotations/find similar RTs

Seq: BAXG01000001.1 Photobacterium sp. JCM 19050 DNA, contig: JCM19050.contig00001, whole genome shotgun sequence (301603 bp)
Overview 1 RT 1: 204310-207016 bp Neighborhood of RT #1 [204310, 207016] RVT-UG11 DUF3653 Feature: gene Location: 204310-204516 bp Feature: gene Location: 204526-204666 bp Feature: gene Location: 204813-205583 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 204945-205398 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 204945-205398 bp Feature: gene Location: 206180-206650 bp Feature: domain Description: DUF3653 Location: 206351-206510 bp Feature: domain Description: DUF3653 Location: 206351 -20651 0 bp Feature: gene Location: 206831-207016 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11, DUF3653 (pfam12375)

Seq: BAXG01000012.1 Photobacterium sp. JCM 19050 DNA, contig: JCM19050.contig00012, whole genome shotgun sequence (129953 bp)
Overview 1 RT 1: 20411-26879 bp Neighborhood of RT #1 [20411, 26950] cas_cyan_RAMP cas_cyan_RAMP cas_cyan_RAMP TIGR03986 RVT-CRISPR RVT-CRISPR Cas_Cas1 Cas2_I_II_III Feature: gene Location: 20411-21523 bp Feature: domain Description: cas_cyan_RAMP Location: 20426-20642 bp Feature: domain Description: cas_cyan_RAMP Location: 2 042 6-2 0642 bp Feature: domain Description: cas_cyan_RAMP Location: 20771-20957 bp Feature: domain Description: cas_cyan_RAMP Location: 2 0771-2 0957 bp Feature: domain Description: cas_cyan_RAMP Location: 21005-21344 bp Feature: domain Description: cas_cyan_RAMP Location: 2 1005-2 1344 bp Feature: gene Location: 21520-23847 bp Feature: domain Description: TIGR03986 Location: 21541-23428 bp Feature: domain Description: TIGR03986 Location: 2 1541-2 342 8 bp Feature: gene Location: 23860-25278 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 24943-25276 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2 4943-2 52 76 bp Feature: gene Location: 25260-25727 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 25272-25551 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2 52 72 -2 5551 bp Feature: gene Location: 25748-26668 bp Feature: domain Description: Cas_Cas1 Location: 25754-26543 bp Feature: domain Description: Cas_Cas1 Location: 2 5754-2 6543 bp Feature: gene Location: 26672-26950 bp Feature: domain Description: Cas2_I_II_III Location: 26684-26879 bp Feature: domain Description: Cas2 _I_II_III Location: 2 6684-2 6879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cas_cyan_RAMP (TIGR02581), TIGR03986 (CRISPR-associated protein), RVT-CRISPR, Cas_Cas1 (pfam01867), Cas2_I_II_III (cl11442)