myRT

myRT report for GCA_001311845.1_ASM131184v1

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Seq: BBCC01000012.1 Desulfosarcina cetonica JCM 12296 DNA, contig: JCM12296.contig00012, whole genome shotgun sequence (66785 bp)
Overview 1 RT 1: 36137-38774 bp Neighborhood of RT #1 [36137, 38818] YfmG YfmG RVT-DGRs Hrd Feature: gene Location: 36137-36985 bp Feature: domain Description: YfmG Location: 36290-36956 bp Feature: domain Description: YfmG Location: 36290-36956 bp Feature: gene Location: 37027-37377 bp Feature: domain Description: YfmG Location: 37108-37225 bp Feature: domain Description: YfmG Location: 371 08-37225 bp Feature: gene Location: 37332-38342 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 37542-38178 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 37542-381 78 bp Feature: gene Location: 38082-38321 bp Feature: gene Location: 38339-38818 bp Feature: domain Description: Hrd Location: 38576-38774 bp Feature: domain Description: Hrd Location: 38576-38774 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), RVT-DGRs, Hrd (LOAD_Hrd)

Seq: BBCC01000016.1 Desulfosarcina cetonica JCM 12296 DNA, contig: JCM12296.contig00016, whole genome shotgun sequence (63964 bp)
Overview 1 RT 1: 46638-49670 bp Neighborhood of RT #1 [46638, 49670] Avd_like RVT-DGRs Feature: gene Location: 46638-47006 bp Feature: domain Description: Avd_like Location: 46665-46971 bp Feature: domain Description: Avd_like Location: 46665-46971 bp Feature: gene Location: 47037-47195 bp Feature: gene Location: 47243-48562 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 47624-48377 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4762 4-48377 bp Feature: gene Location: 48611-49243 bp Feature: gene Location: 49368-49670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs

Seq: BBCC01000426.1 Desulfosarcina cetonica JCM 12296 DNA, contig: JCM12296.contig00426, whole genome shotgun sequence (1645 bp)
Overview 1 RT 1: 3-1416 bp Neighborhood of RT #1 [3, 1556] RVT-GII GIIM Feature: gene Location: 3-179 bp Feature: gene Location: 246-1556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 516-1134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 516-113 4 bp Feature: domain Description: GIIM Note: maturase Location: 1191-1416 bp Feature: domain Description: GIIM Note: maturase Location: 1191-1416 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: BBCC01000487.1 Desulfosarcina cetonica JCM 12296 DNA, contig: JCM12296.contig00487, whole genome shotgun sequence (1008 bp)
Overview 1 RT 1: 1-701 bp Neighborhood of RT #1 [1, 701] RVT-GII Feature: gene Location: 1-504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 277-505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 277-505 bp Feature: gene Location: 501-701 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: BBCC01000501.1 Desulfosarcina cetonica JCM 12296 DNA, contig: JCM12296.contig00501, whole genome shotgun sequence (917 bp)
Overview 1 RT 1: 2-653 bp Neighborhood of RT #1 [2, 838] RVT-GII GIIM Feature: gene Location: 2-838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 -392 bp Feature: domain Description: GIIM Note: maturase Location: 434-653 bp Feature: domain Description: GIIM Note: maturase Location: 434-65 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)