myRT

myRT report for GCA_001312945.1_ASM131294v1

Download annotations/find similar RTs

Seq: BBEX01000076.1 Bradyrhizobium sp. 17-4 DNA, contig: JCM18382.contig00076, whole genome shotgun sequence (9630 bp)
Overview 1 RT 1: 3506-8077 bp Neighborhood of RT #1 [3506, 8082] RVT-UG7 guaA guaA Feature: gene Location: 3506-3862 bp Feature: gene Location: 3960-4730 bp Feature: gene Location: 4714-6366 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 5143-5551 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 51 43-5551 bp Feature: gene Location: 6428-7090 bp Feature: domain Description: guaA Location: 6434-7088 bp Feature: domain Description: guaA Location: 6434-7088 bp Feature: gene Location: 7087-8082 bp Feature: domain Description: guaA Location: 7201-8077 bp Feature: domain Description: guaA Location: 7201 -8077 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, guaA (PRK00074)

Seq: BBEX01000236.1 Bradyrhizobium sp. 17-4 DNA, contig: JCM18382.contig00236, whole genome shotgun sequence (6069 bp)
Overview 1 RT 1: 900-4476 bp Neighborhood of RT #1 [900, 4520] AMNp_N PRK08292 RVT-Retrons RT_Bac_retron_II Trypsin_2 DegQ Feature: gene Location: 900-1529 bp Feature: domain Description: AMNp_N Location: 1173-1506 bp Feature: domain Description: AMNp_N Location: 1173-1506 bp Feature: gene Location: 1598-2599 bp Feature: domain Description: PRK08292 Location: 1601-2597 bp Feature: domain Description: PRK082 92 Location: 1601-2 597 bp Feature: gene Location: 2964-3377 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3087-3342 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3087-3342 bp Feature: gene Location: 3547-4332 bp Feature: domain Description: RT_Bac_retron_II Location: 3595-3760 bp Feature: domain Description: RT_Bac_retron_II Location: 3595-3760 bp Feature: domain Description: Trypsin_2 Location: 4030-4279 bp Feature: domain Description: Trypsin_2 Location: 4030-42 79 bp Feature: gene Location: 4350-4520 bp Feature: domain Description: DegQ Location: 4368-4476 bp Feature: domain Description: DegQ Location: 4368-4476 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AMNp_N (pfam10423), PRK08292 (AMP nucleosidase; Provisional), RVT-Retrons, RT_Bac_retron_II (cd03487), Trypsin_2 (pfam13365), DegQ (pfam08181)

Seq: BBEX01001857.1 Bradyrhizobium sp. 17-4 DNA, contig: JCM18382.contig01857, whole genome shotgun sequence (990 bp)
Overview 1 RT 1: 2-926 bp Neighborhood of RT #1 [2, 988] RVT-Retrons Feature: gene Location: 2-988 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 305-926 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 05-926 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons