myRT

myRT report for GCA_001313105.1_ASM131310v1

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Seq: BBFF01000009.1 Gracilibacillus sp. JCM 18966 DNA, contig: JCM18966.contig00009, whole genome shotgun sequence (126498 bp)
Overview 1 RT 1: 52145-55414 bp Neighborhood of RT #1 [52145, 55414] PRK00024 Intron_maturas2 RVT-CRISPR-like RadC Feature: gene Location: 52145-52321 bp Feature: domain Description: PRK00024 Location: 52184-52316 bp Feature: domain Description: PRK00024 Location: 521 84-5231 6 bp Feature: gene Location: 52454-52780 bp Feature: domain Description: Intron_maturas2 Location: 52505-52706 bp Feature: domain Description: Intron_maturas2 Location: 52505-52706 bp Feature: gene Location: 52746-53777 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 53019-53622 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 5301 9-53622 bp Feature: gene Location: 54296-54871 bp Feature: domain Description: RadC Location: 54317-54845 bp Feature: domain Description: RadC Location: 5431 7-54845 bp Feature: gene Location: 55013-55414 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00024 (DNA repair protein RadC), Intron_maturas2 (pfam01348), RVT-CRISPR, RadC (pfam04002)

Seq: BBFF01000028.1 Gracilibacillus sp. JCM 18966 DNA, contig: JCM18966.contig00028, whole genome shotgun sequence (55410 bp)
Overview 1 RT 1: 13044-17541 bp Neighborhood of RT #1 [13044, 17582] BetT RVT-GII Spore-coat_CotZ Spore_coat_CotO Feature: gene Location: 13044-14615 bp Feature: domain Description: BetT Location: 13056-14559 bp Feature: domain Description: BetT Location: 13056-14559 bp Feature: gene Location: 14870-15145 bp Feature: gene Location: 15211-16257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15526-16141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1552 6-16141 bp Feature: gene Location: 16711-17214 bp Feature: domain Description: Spore-coat_CotZ Location: 16756-17197 bp Feature: domain Description: Spore-coat_CotZ Location: 16756-17197 bp Feature: gene Location: 17391-17582 bp Feature: domain Description: Spore_coat_CotO Location: 17406-17541 bp Feature: domain Description: Spore_coat_CotO Location: 17406-17541 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BetT (COG1292), RVT-GII, Spore-coat_CotZ (pfam10612), Spore_coat_CotO (pfam14153)

Seq: BBFF01000030.1 Gracilibacillus sp. JCM 18966 DNA, contig: JCM18966.contig00030, whole genome shotgun sequence (52904 bp)
Overview 1 RT 1: 5486-10450 bp Neighborhood of RT #1 [5486, 10461] YafY RVT-GII GIIM P-type_ATPase_HM ZntA Feature: gene Location: 5486-5620 bp Feature: domain Description: YafY Location: 5489-5615 bp Feature: domain Description: YafY Location: 5489-5615 bp Feature: gene Location: 6166-6366 bp Feature: gene Location: 6500-7888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6821-7436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6821-743 6 bp Feature: domain Description: GIIM Note: maturase Location: 7493-7712 bp Feature: domain Description: GIIM Note: maturase Location: 7493 -7712 bp Feature: gene Location: 8577-9605 bp Feature: domain Description: P-type_ATPase_HM Location: 8646-9594 bp Feature: domain Description: P-type_ATPase_HM Location: 8646-9594 bp Feature: gene Location: 10096-10461 bp Feature: domain Description: ZntA Location: 10099-10450 bp Feature: domain Description: ZntA Location: 10099-10450 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YafY (COG2378), RVT-GII, GIIM (pfam08388), P-type_ATPase_HM (cd07553), ZntA (COG2217)