myRT

myRT report for GCA_001314845.1_ASM131484v1

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Seq: LJZQ01000016.1 Marinobacter excellens HL-55 ITZ_scaf_132, whole genome shotgun sequence (86622 bp)
Overview 1 RT 1: 111-3392 bp Neighborhood of RT #1 [111, 3392] YiaG RVT-Retrons Feature: gene Location: 111-410 bp Feature: domain Description: YiaG Location: 159-381 bp Feature: domain Description: YiaG Location: 1 59-381 bp Feature: gene Location: 858-1607 bp Feature: gene Location: 1792-2538 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1798-2284 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 798-2284 bp Feature: gene Location: 2634-2969 bp Feature: gene Location: 3075-3392 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YiaG (COG2944), RVT-Retrons

Seq: LJZQ01000037.1 Marinobacter excellens HL-55 ITZ_scaf_442, whole genome shotgun sequence (29038 bp)
Overview 1 RT 1: 25061-28920 bp Neighborhood of RT #1 [25061, 28920] SerB PBP2_HisK RVT-GII group_II_RT_mat Feature: gene Location: 25061-25723 bp Feature: domain Description: SerB Location: 25067-25706 bp Feature: domain Description: SerB Location: 2 5067-2 5706 bp Feature: gene Location: 25948-26712 bp Feature: domain Description: PBP2_HisK Location: 26050-26698 bp Feature: domain Description: PBP2 _HisK Location: 2 6050-2 6698 bp Feature: gene Location: 27350-28456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27626-27995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 762 6-2 7995 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 27998-28253 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2 7998-2 82 53 bp Feature: gene Location: 28525-28920 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SerB (COG0560), PBP2_HisK (cd13704), RVT-GII, group_II_RT_mat (TIGR04416)