myRT

myRT report for GCA_001314875.1_ASM131487v1

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Seq: LJZS01000005.1 Halomonas sp. HL-48 ITZX_scaf_28, whole genome shotgun sequence (250355 bp)
Overview 1 RT 1: 226101-232214 bp Neighborhood of RT #1 [226101, 232219] Sbt_1 ZinT RVT-Retrons smpB PasT Feature: gene Location: 226101-227042 bp Ori: KPQ25224.1 Feature: domain Description: Sbt_1 Location: 226116-227025 bp Feature: domain Description: Sbt_1 Location: 2261 1 6-227025 bp Feature: gene Location: 227165-227875 bp Ori: KPQ25225.1 Gene: znuA Feature: domain Description: ZinT Location: 227279-227873 bp Feature: domain Description: ZinT Location: 227279-227873 bp Feature: gene Location: 228321-230018 bp Ori: KPQ25226.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 228459-229065 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 228459-229065 bp Feature: gene Location: 231168-231659 bp Ori: KPQ25227.1 Gene: smpB Feature: domain Description: smpB Location: 231207-231645 bp Feature: domain Description: smpB Location: 231 207-231 645 bp Feature: gene Location: 231785-232219 bp Ori: KPQ25228.1 Feature: domain Description: PasT Location: 231788-232214 bp Feature: domain Description: PasT Location: 231 788-23221 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Sbt_1 (pfam05982), ZinT (pfam09223), RVT-Retrons, smpB (TIGR00086), PasT (COG2867)

Seq: LJZS01000006.1 Halomonas sp. HL-48 ITZX_scaf_86, whole genome shotgun sequence (163125 bp)
Overview 1 RT 1: 89199-91288 bp Neighborhood of RT #1 [89199, 91288] MarR RVT-Retrons HipB Feature: gene Location: 89199-89366 bp Feature: gene Location: 89366-89758 bp Ori: KPQ24899.1 Feature: domain Description: MarR Location: 89504-89735 bp Feature: domain Description: MarR Location: 89504-89735 bp Feature: gene Location: 89732-90724 bp Ori: KPQ24900.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 89882-90455 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 89882 -90455 bp Feature: gene Location: 90724-91011 bp Ori: KPQ24901.1 Feature: domain Description: HipB Location: 90733-90970 bp Feature: domain Description: HipB Location: 90733-90970 bp Feature: gene Location: 91055-91288 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MarR (pfam01047), RVT-Retrons, HipB (COG1396)