myRT

myRT report for GCA_001316865.2_ASM131686v2

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Seq: LJDW02000052.1 Klebsiella pneumoniae subsp. pneumoniae strain ST14:944535499 contig28, whole genome shotgun sequence (73567 bp)
Overview 1 RT 1: 30262-38880 bp Neighborhood of RT #1 [30262, 38897] YqgA PRK09692 RVT-UG4 FimD FimC Feature: gene Location: 30262-30975 bp Ori: OCO33479.1 Feature: domain Description: YqgA Location: 30268-30970 bp Feature: domain Description: YqgA Location: 30268-30970 bp Feature: gene Location: 31499-32737 bp Feature: domain Description: PRK09692 Location: 31505-32687 bp Feature: domain Description: PRK09692 Location: 31 505-32687 bp Feature: gene Location: 33414-35495 bp Ori: OCO33480.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33825-34269 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33825-34269 bp Feature: gene Location: 35492-38086 bp Ori: OCO33481.1 Feature: domain Description: FimD Location: 35534-38075 bp Feature: domain Description: FimD Location: 35534-38075 bp Feature: gene Location: 38133-38897 bp Ori: OCO33482.1 Feature: domain Description: FimC Location: 38178-38880 bp Feature: domain Description: FimC Location: 381 78-38880 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YqgA (COG1811), PRK09692 (Integrase; provisional), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: LJDW02000121.1 Klebsiella pneumoniae subsp. pneumoniae strain ST14:944535499 contig90, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 59-1151 bp Neighborhood of RT #1 [59, 1543] RVT-GII Feature: gene Location: 59-1543 bp Ori: OCO29508.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII