myRT

myRT report for GCA_001316945.3_ASM131694v3

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Seq: CP023555.1 Klebsiella pneumoniae subsp. pneumoniae strain ST2017:950142398 plasmid p18-43_02, complete sequence (169145 bp)
Overview 1 RT 1: 81684-85783 bp Neighborhood of RT #1 [81684, 85783] zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 RVT-GII Feature: gene Location: 81684-82904 bp Feature: domain Description: zf-ISL3 Location: 81816-81942 bp Feature: domain Description: zf-ISL3 Location: 81 81 6-81 942 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 81960-82107 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 81 960-821 07 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 82158-82863 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 821 58-82863 bp Feature: gene Location: 83101-83352 bp Feature: gene Location: 83352-84836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83754-84444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83754-84444 bp Feature: gene Location: 85070-85300 bp Feature: gene Location: 85602-85783 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT zf-ISL3 (pfam14690), HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610), RVT-GII

Seq: CP023553.1 Klebsiella pneumoniae subsp. pneumoniae strain ST2017:950142398 chromosome (5497952 bp)
Overview 1 RT 1: 14872-17829 bp 2 RT 2: 85826-89933 bp 3 RT 3: 1378657-1382239 bp 4 RT 4: 1486267-1491845 bp 5 RT 5: 1527140-1530863 bp 6 RT 6: 1668225-1672681 bp 7 RT 7: 2005787-2008605 bp 8 RT 8: 5292805-5297614 bp 9 RT 9: 5388649-5392612 bp 10 RT 10: 5473572-5477750 bp Neighborhood of RT #1 [14872, 17829] DinI RVT-GII PRK10597 Neighborhood of RT #2 [85826, 89935] DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [1378657, 1382268] RVT-GII XerC PinE Neighborhood of RT #4 [1486267, 1492021] AAA_15 RVT-Retrons Nuc_deoxyrib_tr Neighborhood of RT #5 [1527140, 1530868] PRK10016 RVT-GII dacD Neighborhood of RT #6 [1668225, 1672680] mglC PRK10982 RVT-GII PRK10982 Neighborhood of RT #7 [2005787, 2008605] RVT-GII Neighborhood of RT #8 [5292805, 5298426] DUF4238 RVT-GII MobA_MobL Neighborhood of RT #9 [5388649, 5392614] PRK10597 RVT-GII PRK05451 PRK10598 Neighborhood of RT #10 [5473572, 5477750] DEDD_Tnp_IS110 Transposase_20 RVT-GII PRK10597 Feature: gene Location: 14872-15114 bp Feature: domain Description: DinI Location: 14923-15103 bp Feature: domain Description: DinI Location: 1492 3-15103 bp Feature: gene Location: 15480-15731 bp Feature: gene Location: 15731-17215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16133-16823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16133-1682 3 bp Feature: gene Location: 17294-17527 bp Feature: domain Description: PRK10597 Location: 17297-17522 bp Feature: domain Description: PRK10597 Location: 172 97-1752 2 bp Feature: gene Location: 17539-17829 bp Feature: gene Location: 85826-86068 bp Feature: domain Description: DinI Location: 85877-86057 bp Feature: domain Description: DinI Location: 85877-86057 bp Feature: gene Location: 86434-86685 bp Feature: gene Location: 86685-88169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87087-87777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87087-87777 bp Feature: gene Location: 88248-88667 bp Feature: domain Description: PRK10276 Location: 88251-88662 bp Feature: domain Description: PRK102 76 Location: 882 51-88662 bp Feature: gene Location: 88670-89935 bp Feature: domain Description: umuC Location: 88673-89933 bp Feature: domain Description: umuC Location: 88673-89933 bp Feature: gene Location: 1378657-1378896 bp Feature: gene Location: 1379049-1379300 bp Feature: gene Location: 1379300-1380784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1379702-1380392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1379702 -1380392 bp Feature: gene Location: 1381217-1381639 bp Feature: domain Description: XerC Location: 1381292-1381598 bp Feature: domain Description: XerC Location: 13812 92 -1381598 bp Feature: gene Location: 1381690-1382268 bp Feature: domain Description: PinE Location: 1381693-1382239 bp Feature: domain Description: PinE Location: 1381693-1382 2 39 bp Feature: gene Location: 1486267-1486497 bp Feature: gene Location: 1487380-1489656 bp Feature: domain Description: AAA_15 Location: 1487413-1488421 bp Feature: domain Description: AAA_15 Location: 1487413-148842 1 bp Feature: gene Location: 1489771-1490871 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1489954-1490482 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1489954-1490482 bp Feature: gene Location: 1491352-1491507 bp Feature: gene Location: 1491527-1492021 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 1491671-1491845 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 1491671-1491845 bp Feature: gene Location: 1527140-1527613 bp Feature: domain Description: PRK10016 Location: 1527143-1527602 bp Feature: domain Description: PRK10016 Location: 152 7143-152 7602 bp Feature: gene Location: 1527522-1527749 bp Feature: gene Location: 1527695-1529179 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1528097-1528787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 152 8097-152 8787 bp Feature: gene Location: 1529179-1529430 bp Feature: gene Location: 1529699-1530868 bp Feature: domain Description: dacD Location: 1529708-1530863 bp Feature: domain Description: dacD Location: 152 9708-1530863 bp Feature: gene Location: 1668225-1669235 bp Feature: domain Description: mglC Location: 1668228-1669233 bp Feature: domain Description: mglC Location: 16682 2 8-16692 33 bp Feature: gene Location: 1669251-1669661 bp Feature: domain Description: PRK10982 Location: 1669260-1669659 bp Feature: domain Description: PRK10982 Location: 16692 60-1669659 bp Feature: gene Location: 1669711-1671195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1670113-1670803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1670113-1670803 bp Feature: gene Location: 1671195-1671446 bp Feature: gene Location: 1671565-1672680 bp Feature: domain Description: PRK10982 Location: 1671613-1672681 bp Feature: domain Description: PRK10982 Location: 1671613-1672 681 bp Feature: gene Location: 2005787-2006044 bp Feature: gene Location: 2006196-2006447 bp Feature: gene Location: 2006447-2007931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2006849-2007539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 006849-2 007539 bp Feature: gene Location: 2008028-2008366 bp Feature: gene Location: 2008366-2008605 bp Feature: gene Location: 5292805-5293809 bp Feature: domain Description: DUF4238 Location: 5292829-5293213 bp Feature: domain Description: DUF42 38 Location: 52 92 82 9-52 932 13 bp Feature: gene Location: 5294420-5294671 bp Feature: gene Location: 5294671-5296155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5295073-5295763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 95073-52 95763 bp Feature: gene Location: 5296298-5296948 bp Feature: gene Location: 5297026-5298426 bp Feature: domain Description: MobA_MobL Location: 5297077-5297614 bp Feature: domain Description: MobA_MobL Location: 52 97077-52 97614 bp Feature: gene Location: 5388649-5388900 bp Feature: domain Description: PRK10597 Location: 5388652-5388889 bp Feature: domain Description: PRK10597 Location: 5388652 -5388889 bp Feature: gene Location: 5389054-5389305 bp Feature: gene Location: 5389305-5390789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5389707-5390397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5389707-5390397 bp Feature: gene Location: 5390882-5391928 bp Feature: domain Description: PRK05451 Location: 5390897-5391923 bp Feature: domain Description: PRK05451 Location: 5390897-539192 3 bp Feature: gene Location: 5392054-5392614 bp Feature: domain Description: PRK10598 Location: 5392057-5392612 bp Feature: domain Description: PRK10598 Location: 5392 057-5392 612 bp Feature: gene Location: 5473572-5474810 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 5473605-5474067 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 5473605-5474067 bp Feature: domain Description: Transposase_20 Location: 5474397-5474646 bp Feature: domain Description: Transposase_2 0 Location: 5474397-5474646 bp Feature: gene Location: 5475401-5475652 bp Feature: gene Location: 5475652-5477136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5476054-5476744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5476054-5476744 bp Feature: gene Location: 5477215-5477448 bp Feature: domain Description: PRK10597 Location: 5477218-5477443 bp Feature: domain Description: PRK10597 Location: 54772 18-5477443 bp Feature: gene Location: 5477460-5477750 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-GII, PRK10597 (DNA damage-inducible protein I; Provisional), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), XerC (COG4973), PinE (COG1961), AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)
PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), mglC (PRK09478), PRK10982 (galactose/methyl galaxtoside transporter ATP-binding protein; Provisional), DUF4238 (pfam14022), MobA_MobL (pfam03389), PRK05451 (dihydroorotase; Provisional), PRK10598 (lipoprotein; Provisional), DEDD_Tnp_IS110 (pfam01548), Transposase_20 (pfam02371)

Seq: CP023554.1 Klebsiella pneumoniae subsp. pneumoniae strain ST2017:950142398 plasmid p18-43_01, complete sequence (212326 bp)
Overview 1 RT 1: 173446-178116 bp Neighborhood of RT #1 [173446, 178116] PRK10276 RVT-GII ArdC Feature: gene Location: 173446-173877 bp Feature: domain Description: PRK10276 Location: 173497-173860 bp Feature: domain Description: PRK10276 Location: 173 497-173 860 bp Feature: gene Location: 174035-174286 bp Feature: gene Location: 174286-175770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 174688-175378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 174688-1753 78 bp Feature: gene Location: 176240-177205 bp Feature: domain Description: ArdC Location: 176366-177200 bp Feature: domain Description: ArdC Location: 1763 66-177200 bp Feature: gene Location: 177685-178116 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ArdC (COG4227)