myRT

myRT report for GCA_001316955.2_v02

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Seq: LJEI02000026.1 Klebsiella pneumoniae subsp. pneumoniae strain ST101:957083896 contig121, whole genome shotgun sequence (41570 bp)
Overview 1 RT 1: 11207-15954 bp Neighborhood of RT #1 [11207, 15959] COG3499 D RVT-UG11 SmpB PRK10724 Feature: gene Location: 11207-11692 bp Ori: OCO38452.1 Feature: domain Description: COG3499 Location: 11210-11636 bp Feature: domain Description: COG3499 Location: 1 1 21 0-1 1 636 bp Feature: gene Location: 11689-12789 bp Ori: OCO38453.1 Feature: domain Description: D Location: 11704-12775 bp Feature: domain Description: D Location: 1 1 704-1 2775 bp Feature: gene Location: 13502-14275 bp Ori: OCO38454.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 13637-14090 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 1 3637-1 4090 bp Feature: gene Location: 14890-15372 bp Ori: OCO38455.1 Feature: domain Description: SmpB Location: 14920-15364 bp Feature: domain Description: SmpB Location: 1 4920-1 5364 bp Feature: gene Location: 15522-15959 bp Ori: OCO38456.1 Feature: domain Description: PRK10724 Location: 15525-15954 bp Feature: domain Description: PRK1 0724 Location: 1 5525-1 5954 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3499 (Phage protein U ), D (PHA02561), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)

Seq: LJEI02000105.1 Klebsiella pneumoniae subsp. pneumoniae strain ST101:957083896 contig27, whole genome shotgun sequence (1893 bp)
Overview 1 RT 1: 350-1442 bp Neighborhood of RT #1 [350, 1834] RVT-GII Feature: gene Location: 350-1834 bp Ori: OCO32386.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752 -1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: LJEI02000099.1 Klebsiella pneumoniae subsp. pneumoniae strain ST101:957083896 contig21, whole genome shotgun sequence (2271 bp)
Overview 1 RT 1: 92-1355 bp Neighborhood of RT #1 [92, 1600] RVT-GII GIIM Feature: gene Location: 92-1600 bp Ori: OCO32847.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 350-1082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 50-1082 bp Feature: domain Description: GIIM Note: maturase Location: 1157-1355 bp Feature: domain Description: GIIM Note: maturase Location: 1157-13 55 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)