myRT

myRT report for GCA_001317055.2_ASM131705v2

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Seq: LJEO02000022.1 Enterobacter roggenkampii strain ST433:953102574 contig118, whole genome shotgun sequence (5153 bp)
Overview 1 RT 1: 1730-5031 bp Neighborhood of RT #1 [1730, 5057] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C SPEC COG3436 RVT_N RVT-GII Feature: gene Location: 1730-3313 bp Ori: OEH09257.1 Feature: domain Description: LZ_Tnp_IS66 Location: 1889-2099 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 889-2099 bp Feature: domain Description: zf-IS66 Location: 2126-2255 bp Feature: domain Description: zf-IS66 Location: 21 26-2255 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2300-3158 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2300-31 58 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3182-3290 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 31 82-3290 bp Feature: gene Location: 3369-3950 bp Feature: domain Description: SPEC Location: 3384-3609 bp Feature: domain Description: SPEC Location: 3384-3609 bp Feature: domain Description: COG3436 Location: 3642-3951 bp Feature: domain Description: COG3436 Location: 3642-3951 bp Feature: gene Location: 4557-5057 bp Ori: OEH09256.1 Feature: domain Description: RVT_N Location: 4605-4848 bp Feature: domain Description: RVT_N Location: 4605-4848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4893-5031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4893-5031 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), SPEC (smart00150), COG3436 (Transposase ), RVT_N (pfam13655), RVT-GII

Seq: LJEO02000171.1 Enterobacter roggenkampii strain ST433:953102574 contig46, whole genome shotgun sequence (41454 bp)
Overview 1 RT 1: 37747-41277 bp Neighborhood of RT #1 [37747, 41454] proA PRK09692 RVT-UG3 Feature: gene Location: 37747-39000 bp Ori: OEH00705.1 Feature: domain Description: proA Location: 37774-38965 bp Feature: domain Description: proA Location: 37774-38965 bp Feature: gene Location: 39351-40517 bp Ori: OEH00706.1 Feature: domain Description: PRK09692 Location: 39357-40503 bp Feature: domain Description: PRK09692 Location: 39357-40503 bp Feature: gene Location: 40521-41454 bp Ori: OEH00707.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 40809-41277 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 40809-412 77 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), PRK09692 (Integrase; provisional), RVT-UG3

Seq: LJEO02000076.1 Enterobacter roggenkampii strain ST433:953102574 contig167, whole genome shotgun sequence (1097 bp)
Overview 1 RT 1: 1-829 bp Neighborhood of RT #1 [1, 1026] RVT-UG8 Feature: gene Location: 1-1026 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 385-829 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3 85-829 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8