myRT

myRT report for GCA_001317135.2_48_S23v.02

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Seq: LJES02000021.1 Citrobacter freundii strain ST63:944526466 L_contig000020, whole genome shotgun sequence (82939 bp)
Overview 1 RT 1: 67938-80525 bp Neighborhood of RT #1 [67938, 80527] NERD STKc_PknB_like STKc_PknB_like KOG1803 KOG1803 RVT-Retrons HTH_45 HTH_45 PRK10507 Feature: gene Location: 67938-72782 bp Feature: domain Description: NERD Location: 67980-68313 bp Feature: domain Description: NERD Location: 67980-6831 3 bp Feature: domain Description: STKc_PknB_like Location: 68760-69354 bp Feature: domain Description: STKc_PknB_like Location: 68760-69354 bp Feature: domain Description: STKc_PknB_like Location: 69585-69852 bp Feature: domain Description: STKc_PknB_like Location: 69585-69852 bp Feature: domain Description: KOG1803 Location: 71001-71388 bp Feature: domain Description: KOG1 803 Location: 71 001 -71 388 bp Feature: domain Description: KOG1803 Location: 71823-72741 bp Feature: domain Description: KOG1 803 Location: 71 823-72741 bp Feature: gene Location: 72779-74230 bp Feature: gene Location: 74353-75084 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 74356-74818 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 74356-7481 8 bp Feature: gene Location: 75706-77019 bp Feature: domain Description: HTH_45 Location: 76288-76357 bp Feature: domain Description: HTH_45 Location: 76288-76357 bp Feature: domain Description: HTH_45 Location: 76732-76909 bp Feature: domain Description: HTH_45 Location: 76732-76909 bp Feature: gene Location: 78668-80527 bp Feature: domain Description: PRK10507 Location: 78671-80525 bp Feature: domain Description: PRK1 0507 Location: 78671 -80525 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NERD (pfam08378), STKc_PknB_like (cd14014), KOG1803 (KOG1803, DNA helicase ), RVT-Retrons, HTH_45 (pfam14947), PRK10507 (bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase; Provisional)

Seq: LJES02000140.1 Citrobacter freundii strain ST63:944526466 L_contig000139, whole genome shotgun sequence (2273 bp)
Overview 1 RT 1: 93-1356 bp Neighborhood of RT #1 [93, 1601] RVT-GII GIIM Feature: gene Location: 93-1601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 351-1083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 351-1083 bp Feature: domain Description: GIIM Note: maturase Location: 1158-1356 bp Feature: domain Description: GIIM Note: maturase Location: 1158-1356 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)