myRT

myRT report for GCA_001317165.2_52_S26v.02

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Seq: LJEU02000058.1 Klebsiella pneumoniae subsp. pneumoniae strain ST101:939996824 contig150, whole genome shotgun sequence (2271 bp)
Overview 1 RT 1: 92-1355 bp Neighborhood of RT #1 [92, 1600] RVT-GII GIIM Feature: gene Location: 92-1600 bp Ori: OCO72486.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 350-1082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 350-1 082 bp Feature: domain Description: GIIM Note: maturase Location: 1157-1355 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 57-1 355 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LJEU02000061.1 Klebsiella pneumoniae subsp. pneumoniae strain ST101:939996824 contig153, whole genome shotgun sequence (1877 bp)
Overview 1 RT 1: 1-1875 bp Neighborhood of RT #1 [1, 1877] RVT-Retrons Feature: gene Location: 1-1157 bp Feature: gene Location: 1272-1877 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1452-1875 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1452 -1875 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: LJEU02000147.1 Klebsiella pneumoniae subsp. pneumoniae strain ST101:939996824 contig94, whole genome shotgun sequence (42132 bp)
Overview 1 RT 1: 11769-16516 bp Neighborhood of RT #1 [11769, 16521] COG3499 D RVT-UG11 SmpB PRK10724 Feature: gene Location: 11769-12254 bp Ori: OCO65309.1 Feature: domain Description: COG3499 Location: 11772-12198 bp Feature: domain Description: COG3 499 Location: 11772-12198 bp Feature: gene Location: 12251-13351 bp Ori: OCO65310.1 Feature: domain Description: D Location: 12266-13337 bp Feature: domain Description: D Location: 12266-13 3 3 7 bp Feature: gene Location: 14064-14837 bp Ori: OCO65311.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 14199-14652 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 14199-14652 bp Feature: gene Location: 15452-15934 bp Ori: OCO65312.1 Feature: domain Description: SmpB Location: 15482-15926 bp Feature: domain Description: SmpB Location: 15482-15926 bp Feature: gene Location: 16084-16521 bp Ori: OCO65313.1 Feature: domain Description: PRK10724 Location: 16087-16516 bp Feature: domain Description: PRK10724 Location: 16087-16516 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3499 (Phage protein U ), D (PHA02561), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)

Seq: LJEU02000060.1 Klebsiella pneumoniae subsp. pneumoniae strain ST101:939996824 contig152, whole genome shotgun sequence (1893 bp)
Overview 1 RT 1: 60-1152 bp Neighborhood of RT #1 [60, 1544] RVT-GII Feature: gene Location: 60-1544 bp Ori: OCO72389.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 462-1152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 62-1152 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII