myRT

myRT report for GCA_001319305.1_4976_6_11

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Seq: CIJR01000061.1 Yersinia enterocolitica genome assembly 4976_6#11, scaffold ERS008638SCcontig000061, whole genome shotgun sequence (16439 bp)
Overview 1 RT 1: 10662-16405 bp Neighborhood of RT #1 [10662, 16431] TraD Shufflon_N RVT-Retrons RVT-Retrons PRK09692 Feature: gene Location: 10662-10937 bp Ori: CNK14940.1 Feature: domain Description: TraD Location: 10740-10917 bp Feature: domain Description: TraD Location: 1 0740-1 091 7 bp Feature: gene Location: 11125-12441 bp Ori: CNK14962.1 Feature: domain Description: Shufflon_N Location: 11269-12205 bp Feature: domain Description: Shufflon_N Location: 1 1 269-1 2205 bp Feature: gene Location: 13107-13478 bp Ori: CNK14982.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13245-13476 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 3245-1 3476 bp Feature: gene Location: 13642-14829 bp Ori: CNK15015.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13645-13870 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 3645-1 3870 bp Feature: gene Location: 14982-16082 bp Feature: gene Location: 16162-16431 bp Ori: CNK15068.1 Gene: intA_2 Feature: domain Description: PRK09692 Location: 16165-16405 bp Feature: domain Description: PRK09692 Location: 1 61 65-1 6405 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraD (pfam06412), Shufflon_N (pfam04917), RVT-Retrons, PRK09692 (Integrase; provisional)