myRT

myRT report for GCA_001319385.1_5103_7_8

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Seq: CHDN01000060.1 Yersinia enterocolitica genome assembly 5103_7#8, scaffold ERS008587SCcontig000060, whole genome shotgun sequence (16088 bp)
Overview 1 RT 1: 10197-16060 bp Neighborhood of RT #1 [10197, 16086] TraD Shufflon_N RVT-Retrons RVT-Retrons PRK09692 Feature: gene Location: 10197-10472 bp Ori: CNC77731.1 Feature: domain Description: TraD Location: 10275-10452 bp Feature: domain Description: TraD Location: 1 0275-1 0452 bp Feature: gene Location: 10660-11976 bp Ori: CNC77767.1 Feature: domain Description: Shufflon_N Location: 10804-11740 bp Feature: domain Description: Shufflon_N Location: 1 0804-1 1 740 bp Feature: gene Location: 12642-13013 bp Ori: CNC77800.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12780-13011 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 2780-1 301 1 bp Feature: gene Location: 13177-14364 bp Ori: CNC77835.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13180-13405 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 31 80-1 3405 bp Feature: gene Location: 14517-15617 bp Feature: gene Location: 15697-16086 bp Ori: CNC77903.1 Gene: intA_1 Feature: domain Description: PRK09692 Location: 15700-16060 bp Feature: domain Description: PRK09692 Location: 1 5700-1 6060 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraD (pfam06412), Shufflon_N (pfam04917), RVT-Retrons, PRK09692 (Integrase; provisional)