myRT

myRT report for GCA_001319425.1_4976_7_4

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Seq: CIFH01000032.1 Yersinia enterocolitica genome assembly 4976_7#4, scaffold ERS008643SCcontig000032, whole genome shotgun sequence (48367 bp)
Overview 1 RT 1: 1435-8543 bp Neighborhood of RT #1 [1435, 8551] PRK09692 RVT-Retrons Ogr_Delta COG4643 COG5519 Feature: gene Location: 1435-2607 bp Ori: CND86411.1 Gene: intS_3 Feature: domain Description: PRK09692 Location: 1444-2587 bp Feature: domain Description: PRK09692 Location: 1 444-2587 bp Feature: gene Location: 2604-3320 bp Feature: gene Location: 3314-4261 bp Ori: CND86467.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3326-3803 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3326-3803 bp Feature: gene Location: 5209-5556 bp Ori: CND86493.1 Feature: domain Description: Ogr_Delta Location: 5233-5368 bp Feature: domain Description: Ogr_Delta Location: 5233-5368 bp Feature: gene Location: 5867-8551 bp Ori: CND86520.1 Gene: traC_2 Feature: domain Description: COG4643 Location: 5876-6824 bp Feature: domain Description: COG4643 Location: 5876-6824 bp Feature: domain Description: COG5519 Location: 6968-8543 bp Feature: domain Description: COG551 9 Location: 6968-8543 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, Ogr_Delta (pfam04606), COG4643 (Uncharacterized domain associated with phage/plasmid primase ), COG5519 (Uncharcterized protein, DUF927 family )