myRT

myRT report for GCA_001319445.1_4976_7_2

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Seq: CHJR01000067.1 Yersinia enterocolitica genome assembly 4976_7#2, scaffold ERS008641SCcontig000067, whole genome shotgun sequence (16414 bp)
Overview 1 RT 1: 10480-16349 bp Neighborhood of RT #1 [10480, 16375] TraD Shufflon_N RVT-Retrons RVT-Retrons PRK09692 Feature: gene Location: 10480-10755 bp Ori: CNC68015.1 Feature: domain Description: TraD Location: 10558-10735 bp Feature: domain Description: TraD Location: 1 0558-1 0735 bp Feature: gene Location: 10943-12259 bp Ori: CNC68043.1 Feature: domain Description: Shufflon_N Location: 11087-12023 bp Feature: domain Description: Shufflon_N Location: 1 1 087-1 2023 bp Feature: gene Location: 12925-13296 bp Ori: CNC68072.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13063-13294 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 3063-1 3294 bp Feature: gene Location: 13460-14647 bp Ori: CNC68106.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13463-13688 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 3463-1 3688 bp Feature: gene Location: 14800-15900 bp Feature: gene Location: 15980-16375 bp Ori: CNC68165.1 Gene: intA_1 Feature: domain Description: PRK09692 Location: 15983-16349 bp Feature: domain Description: PRK09692 Location: 1 5983-1 6349 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraD (pfam06412), Shufflon_N (pfam04917), RVT-Retrons, PRK09692 (Integrase; provisional)