myRT

myRT report for GCA_001319805.1_ASM131980v1

Download annotations/find similar RTs

Seq: BBSK01000139.1 Burkholderia sp. E168m22 DNA, contig: contig00139, whole genome shotgun sequence (147410 bp)
Overview 1 RT 1: 39882-45248 bp Neighborhood of RT #1 [39882, 45271] his_ut_repres FIN RVT-Retrons Histone_HNS MFS_MucK Feature: gene Location: 39882-40691 bp Feature: domain Description: his_ut_repres Location: 40014-40686 bp Feature: domain Description: his_ut_repres Location: 4001 4-40686 bp Feature: gene Location: 40998-41486 bp Feature: domain Description: FIN Location: 41094-41451 bp Feature: domain Description: FIN Location: 41 094-41 451 bp Feature: gene Location: 41739-43088 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42204-42840 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42204-42840 bp Feature: gene Location: 43171-43737 bp Feature: domain Description: Histone_HNS Location: 43429-43666 bp Feature: domain Description: Histone_HNS Location: 43429-43666 bp Feature: gene Location: 44024-45271 bp Feature: domain Description: MFS_MucK Location: 44114-45248 bp Feature: domain Description: MFS_MucK Location: 441 1 4-45248 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_ut_repres (TIGR02018), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816), MFS_MucK (cd17371)

Seq: BBSK01000162.1 Burkholderia sp. E168m22 DNA, contig: contig00162, whole genome shotgun sequence (1861 bp)
Overview 1 RT 1: 3-1616 bp Neighborhood of RT #1 [3, 1774] RVT-GII GIIM Feature: gene Location: 3-155 bp Feature: gene Location: 485-1774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 740-1355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 740-1355 bp Feature: domain Description: GIIM Note: maturase Location: 1415-1616 bp Feature: domain Description: GIIM Note: maturase Location: 1415-1616 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)