myRT

myRT report for GCA_001320745.1_ASM132074v1

Download annotations/find similar RTs

Seq: BCBM01000005.1 Pseudomonas sp. NBRC 111136 DNA, contig: PPU23_CON00220, whole genome shotgun sequence (274749 bp) Associated domains: SUA5 (pfam03481), Smf (COG0758), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), def (PRK00150), fmt (TIGR00460)

Seq: BCBM01000009.1 Pseudomonas sp. NBRC 111136 DNA, contig: PPU23_CON00320, whole genome shotgun sequence (69962 bp) Associated domains: MrcA (COG5009), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), PilM (pfam07419)

Seq: BCBM01000027.1 Pseudomonas sp. NBRC 111136 DNA, contig: PPU23_CON00920, whole genome shotgun sequence (108743 bp) Associated domains: DsbG (COG1651), RVT-GII, GIIM (pfam08388), HTH_28 (pfam13518), DDE_3 (pfam13358), Pyr_redox_dim (pfam02852)

Seq: BCBM01000035.1 Pseudomonas sp. NBRC 111136 DNA, contig: PPU23_CON01210, whole genome shotgun sequence (75991 bp) Associated domains: RVT-GII, TnpB_IS66 (pfam05717), AcrR (COG1309), PRK05478 (3-isopropylmalate dehydratase large subunit), PDR_like (cd06185), InsE (COG2963)

Seq: BCBM01000088.1 Pseudomonas sp. NBRC 111136 DNA, contig: PPU23_CON03910, whole genome shotgun sequence (63277 bp) Associated domains: ribD (PRK10786), TIGR00244 (transcriptional regulator NrdR), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), YbaY (COG3126), Nnt1 (COG3897)

Seq: BCBM01000152.1 Pseudomonas sp. NBRC 111136 DNA, contig: PPU23_CON08610, whole genome shotgun sequence (11508 bp) Associated domains: RVT-GII, GIIM (pfam08388)

Seq: BCBM01000161.1 Pseudomonas sp. NBRC 111136 DNA, contig: PPU23_CON09510, whole genome shotgun sequence (5932 bp) Associated domains: RVT-GII, GIIM (pfam08388), IS5 (COG3039), PRK09906 (DNA-binding transcriptional regulator HcaR; Provisional)

Seq: BCBM01000195.1 Pseudomonas sp. NBRC 111136 DNA, contig: PPU23_CON90223, whole genome shotgun sequence (869 bp) Associated domains: RVT-GII