myRT

myRT report for GCA_001326495.1_5310_1_8

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Seq: CHYT01000011.1 Streptococcus pneumoniae genome assembly 5310_1#8, scaffold ERS012478SCcontig000011, whole genome shotgun sequence (65803 bp)
Overview 1 RT 1: 48964-62098 bp Neighborhood of RT #1 [48964, 62232] AbiEii PHA03411 COG4646 COG4646 RVT-GII GIIM COG4646 KOG1000 SSB_OBF Feature: gene Location: 48964-49971 bp Feature: domain Description: AbiEii Location: 49087-49921 bp Feature: domain Description: AbiEii Location: 49087-49921 bp Feature: gene Location: 50041-56343 bp Feature: domain Description: PHA03411 Location: 53626-53872 bp Feature: domain Description: PHA0341 1 Location: 53626-53872 bp Feature: domain Description: COG4646 Location: 54187-54922 bp Feature: domain Description: COG4646 Location: 541 87-54922 bp Feature: domain Description: COG4646 Location: 55189-56317 bp Feature: domain Description: COG4646 Location: 551 89-5631 7 bp Feature: gene Location: 57020-58927 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57344-58058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57344-58058 bp Feature: domain Description: GIIM Note: maturase Location: 58166-58370 bp Feature: domain Description: GIIM Note: maturase Location: 581 66-58370 bp Feature: gene Location: 59105-61531 bp Feature: domain Description: COG4646 Location: 59108-59669 bp Feature: domain Description: COG4646 Location: 591 08-59669 bp Feature: domain Description: KOG1000 Location: 60020-60254 bp Feature: domain Description: KOG1 000 Location: 60020-60254 bp Feature: gene Location: 61573-62232 bp Feature: domain Description: SSB_OBF Location: 61828-62098 bp Feature: domain Description: SSB_OBF Location: 61 828-62098 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), PHA03411 (putative methyltransferase; Provisional), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, GIIM (pfam08388), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), SSB_OBF (cd04496)