myRT

myRT report for GCA_001327395.1_7910_7_29

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Seq: CIAY01000030.1 Burkholderia pseudomallei genome assembly 7910_7#29, scaffold ERS013361SCcontig000030, whole genome shotgun sequence (84034 bp)
Overview 1 RT 1: 10229-17182 bp Neighborhood of RT #1 [10229, 17182] RVT-UG8 RVT-UG3 Feature: gene Location: 10229-10480 bp Feature: gene Location: 10653-10970 bp Feature: gene Location: 11458-13530 bp Ori: CPG56109.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 12073-12529 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 2073-1 2529 bp Feature: gene Location: 13523-14869 bp Ori: CPG56188.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 13973-14453 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 3973-1 4453 bp Feature: gene Location: 15448-16836 bp Feature: gene Location: 16859-17182 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, RVT-UG3

Seq: CIAY01000002.1 Burkholderia pseudomallei genome assembly 7910_7#29, scaffold ERS013361SCcontig000002, whole genome shotgun sequence (456223 bp)
Overview 1 RT 1: 10147-18076 bp Neighborhood of RT #1 [10147, 18264] SMC_prok_A SMC_prok_A SMC_prok_A RVT-UG1 DUF4145 HTH_XRE Feature: gene Location: 10147-10647 bp Feature: gene Location: 10634-12553 bp Ori: CPE48314.1 Feature: domain Description: SMC_prok_A Location: 10712-10811 bp Feature: domain Description: SMC_prok_A Location: 10712 -10811 bp Feature: domain Description: SMC_prok_A Location: 11327-11597 bp Feature: domain Description: SMC_prok_A Location: 1132 7-11597 bp Feature: domain Description: SMC_prok_A Location: 11747-12137 bp Feature: domain Description: SMC_prok_A Location: 11747-12 137 bp Feature: gene Location: 12617-16570 bp Ori: CPE48335.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 13340-13856 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 13340-13856 bp Feature: gene Location: 16580-17188 bp Ori: CPE48384.1 Feature: domain Description: DUF4145 Location: 16853-17111 bp Feature: domain Description: DUF4145 Location: 16853-17111 bp Feature: gene Location: 17887-18264 bp Ori: CPE48403.1 Feature: domain Description: HTH_XRE Location: 17917-18076 bp Feature: domain Description: HTH_XRE Location: 17917-18076 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SMC_prok_A (TIGR02169), RVT-UG1, DUF4145 (pfam13643), HTH_XRE (smart00530)