myRT

myRT report for GCA_001334155.1_5737_2_4

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Seq: CFIY01000019.1 Streptococcus pneumoniae genome assembly 5737_2#4, scaffold ERS096097SCcontig000019, whole genome shotgun sequence (38020 bp)
Overview 1 RT 1: 34551-37619 bp Neighborhood of RT #1 [34551, 37711] DUF2969 rpsA RVT-GII GIIM Feature: gene Location: 34551-34781 bp Feature: domain Description: DUF2969 Location: 34554-34773 bp Feature: domain Description: DUF2969 Location: 34554-34773 bp Feature: gene Location: 35154-36356 bp Feature: domain Description: rpsA Location: 35157-36345 bp Feature: domain Description: rpsA Location: 351 57-36345 bp Feature: gene Location: 36533-37711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36737-37352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36737-37352 bp Feature: domain Description: GIIM Note: maturase Location: 37406-37619 bp Feature: domain Description: GIIM Note: maturase Location: 37406-3761 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2969 (pfam11184), rpsA (TIGR00717), RVT-GII, GIIM (pfam08388)

Seq: CFIY01000023.1 Streptococcus pneumoniae genome assembly 5737_2#4, scaffold ERS096097SCcontig000023, whole genome shotgun sequence (34517 bp)
Overview 1 RT 1: 5432-12190 bp Neighborhood of RT #1 [5432, 12190] TraC-F-type Peptidase_M23 Phage_lysozyme2 PRK08581 RVT-GII cas_Csn1 Feature: gene Location: 5432-5791 bp Feature: domain Description: TraC-F-type Location: 5447-5639 bp Feature: domain Description: TraC-F-type Location: 5447-5639 bp Feature: gene Location: 5802-8489 bp Feature: domain Description: Peptidase_M23 Location: 7215-7419 bp Feature: domain Description: Peptidase_M2 3 Location: 72 15-7419 bp Feature: domain Description: Phage_lysozyme2 Location: 7590-8130 bp Feature: domain Description: Phage_lysozyme2 Location: 7590-8130 bp Feature: domain Description: PRK08581 Location: 8256-8472 bp Feature: domain Description: PRK08581 Location: 82 56-8472 bp Feature: gene Location: 9198-11120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9525-10260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 952 5-102 60 bp Feature: domain Description: cas_Csn1 Location: 10671-10950 bp Feature: domain Description: cas_Csn1 Location: 10671-10950 bp Feature: gene Location: 11416-12024 bp Feature: gene Location: 12026-12190 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein), RVT-GII, cas_Csn1 (TIGR01865)